Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rc3h2P0C090 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.93■□□□□ 0.78
Rc3h2P0C090 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rc3h2P0C090 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Rc3h2P0C090 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rc3h2P0C090 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rc3h2P0C090 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rc3h2P0C090 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rc3h2P0C090 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Rc3h2P0C090 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rc3h2P0C090 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rc3h2P0C090 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Rc3h2P0C090 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.91■□□□□ 0.78
Rc3h2P0C090 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rc3h2P0C090 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rc3h2P0C090 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.91■□□□□ 0.78
Rc3h2P0C090 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Rc3h2P0C090 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.91■□□□□ 0.78
Rc3h2P0C090 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rc3h2P0C090 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rc3h2P0C090 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Rc3h2P0C090 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rc3h2P0C090 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Rc3h2P0C090 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rc3h2P0C090 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.91■□□□□ 0.78
Rc3h2P0C090 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rc3h2P0C090 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rc3h2P0C090 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.9■□□□□ 0.78
Rc3h2P0C090 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rc3h2P0C090 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.9■□□□□ 0.78
Rc3h2P0C090 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.9■□□□□ 0.78
Rc3h2P0C090 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rc3h2P0C090 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rc3h2P0C090 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rc3h2P0C090 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rc3h2P0C090 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rc3h2P0C090 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rc3h2P0C090 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rc3h2P0C090 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rc3h2P0C090 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.78
Rc3h2P0C090 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rc3h2P0C090 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.89■□□□□ 0.77
Rc3h2P0C090 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Rc3h2P0C090 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rc3h2P0C090 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rc3h2P0C090 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rc3h2P0C090 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rc3h2P0C090 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Rc3h2P0C090 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rc3h2P0C090 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rc3h2P0C090 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rc3h2P0C090 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.88■□□□□ 0.77
Rc3h2P0C090 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.88■□□□□ 0.77
Rc3h2P0C090 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.88■□□□□ 0.77
Rc3h2P0C090 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rc3h2P0C090 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.88■□□□□ 0.77
Rc3h2P0C090 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rc3h2P0C090 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Rc3h2P0C090 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rc3h2P0C090 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.87■□□□□ 0.77
Rc3h2P0C090 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rc3h2P0C090 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rc3h2P0C090 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rc3h2P0C090 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.87■□□□□ 0.77
Rc3h2P0C090 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rc3h2P0C090 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rc3h2P0C090 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.87■□□□□ 0.77
Rc3h2P0C090 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rc3h2P0C090 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rc3h2P0C090 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rc3h2P0C090 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.86■□□□□ 0.77
Rc3h2P0C090 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.86■□□□□ 0.77
Rc3h2P0C090 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Rc3h2P0C090 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rc3h2P0C090 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.86■□□□□ 0.77
Rc3h2P0C090 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rc3h2P0C090 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rc3h2P0C090 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rc3h2P0C090 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.86■□□□□ 0.77
Rc3h2P0C090 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rc3h2P0C090 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.86■□□□□ 0.77
Rc3h2P0C090 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rc3h2P0C090 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rc3h2P0C090 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rc3h2P0C090 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rc3h2P0C090 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.85■□□□□ 0.77
Rc3h2P0C090 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rc3h2P0C090 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.85■□□□□ 0.77
Rc3h2P0C090 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rc3h2P0C090 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Rc3h2P0C090 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Rc3h2P0C090 AA386476-201ENSMUST00000098781 1665 ntBASIC19.84■□□□□ 0.77
Rc3h2P0C090 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rc3h2P0C090 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rc3h2P0C090 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rc3h2P0C090 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rc3h2P0C090 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rc3h2P0C090 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rc3h2P0C090 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.84■□□□□ 0.77
Rc3h2P0C090 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 948.2 ms