Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Hoxc9P09633 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Hoxc9P09633 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Hoxc9P09633 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Hoxc9P09633 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC25.65■■□□□ 1.7
Hoxc9P09633 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Hoxc9P09633 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC25.65■■□□□ 1.7
Hoxc9P09633 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Hoxc9P09633 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Hoxc9P09633 Gm13534-201ENSMUST00000121169 513 ntBASIC25.64■■□□□ 1.7
Hoxc9P09633 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
Hoxc9P09633 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC25.64■■□□□ 1.7
Hoxc9P09633 Gm6420-201ENSMUST00000193885 723 ntBASIC25.64■■□□□ 1.7
Hoxc9P09633 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Hoxc9P09633 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Hoxc9P09633 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Hoxc9P09633 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Hoxc9P09633 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Hoxc9P09633 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC25.63■■□□□ 1.69
Hoxc9P09633 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Hoxc9P09633 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
Hoxc9P09633 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC25.63■■□□□ 1.69
Hoxc9P09633 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC25.63■■□□□ 1.69
Hoxc9P09633 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC25.63■■□□□ 1.69
Hoxc9P09633 Snhg20-203ENSMUST00000182811 2153 ntBASIC25.63■■□□□ 1.69
Hoxc9P09633 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Hoxc9P09633 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
Hoxc9P09633 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Hoxc9P09633 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Hoxc9P09633 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Hoxc9P09633 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Hoxc9P09633 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Hoxc9P09633 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Hoxc9P09633 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Hoxc9P09633 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Hoxc9P09633 Gm10655-201ENSMUST00000098658 1397 ntBASIC25.61■■□□□ 1.69
Hoxc9P09633 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
Hoxc9P09633 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
Hoxc9P09633 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Hoxc9P09633 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC25.61■■□□□ 1.69
Hoxc9P09633 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC25.61■■□□□ 1.69
Hoxc9P09633 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC25.61■■□□□ 1.69
Hoxc9P09633 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Hoxc9P09633 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Hoxc9P09633 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Hoxc9P09633 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
Hoxc9P09633 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Hoxc9P09633 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC25.6■■□□□ 1.69
Hoxc9P09633 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Hoxc9P09633 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Hoxc9P09633 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Hoxc9P09633 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC25.6■■□□□ 1.69
Hoxc9P09633 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
Hoxc9P09633 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Hoxc9P09633 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Hoxc9P09633 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
Hoxc9P09633 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC25.6■■□□□ 1.69
Hoxc9P09633 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Hoxc9P09633 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Hoxc9P09633 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Hoxc9P09633 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Hoxc9P09633 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Hoxc9P09633 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
Hoxc9P09633 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Hoxc9P09633 Nespas-201ENSMUST00000143738 1083 ntBASIC25.59■■□□□ 1.69
Hoxc9P09633 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Hoxc9P09633 Gm6365-201ENSMUST00000054711 744 ntBASIC25.59■■□□□ 1.69
Hoxc9P09633 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Hoxc9P09633 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Hoxc9P09633 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Hoxc9P09633 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
Hoxc9P09633 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC25.59■■□□□ 1.69
Hoxc9P09633 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC25.58■■□□□ 1.69
Hoxc9P09633 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC25.58■■□□□ 1.69
Hoxc9P09633 Gm12527-201ENSMUST00000117967 564 ntBASIC25.58■■□□□ 1.69
Hoxc9P09633 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Hoxc9P09633 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
Hoxc9P09633 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Hoxc9P09633 Gm43859-201ENSMUST00000200075 1412 ntBASIC25.57■■□□□ 1.68
Hoxc9P09633 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Hoxc9P09633 Gm7290-201ENSMUST00000104990 617 ntBASIC25.57■■□□□ 1.68
Hoxc9P09633 Gm12918-201ENSMUST00000120234 636 ntBASIC25.57■■□□□ 1.68
Hoxc9P09633 Gm15710-201ENSMUST00000121821 636 ntBASIC25.57■■□□□ 1.68
Hoxc9P09633 Gm5075-201ENSMUST00000196916 622 ntBASIC25.57■■□□□ 1.68
Hoxc9P09633 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC25.57■■□□□ 1.68
Hoxc9P09633 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC25.57■■□□□ 1.68
Hoxc9P09633 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Hoxc9P09633 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Hoxc9P09633 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Hoxc9P09633 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Hoxc9P09633 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
Hoxc9P09633 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Hoxc9P09633 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Hoxc9P09633 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC25.56■■□□□ 1.68
Hoxc9P09633 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Hoxc9P09633 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Hoxc9P09633 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Hoxc9P09633 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC25.55■■□□□ 1.68
Hoxc9P09633 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Hoxc9P09633 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC25.55■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms