Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.57■□□□□ 0.56
Sod1P08228 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sod1P08228 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sod1P08228 Gm7290-201ENSMUST00000104990 617 ntBASIC18.57■□□□□ 0.56
Sod1P08228 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.57■□□□□ 0.56
Sod1P08228 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sod1P08228 Gm12918-201ENSMUST00000120234 636 ntBASIC18.57■□□□□ 0.56
Sod1P08228 Gm15710-201ENSMUST00000121821 636 ntBASIC18.57■□□□□ 0.56
Sod1P08228 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.57■□□□□ 0.56
Sod1P08228 Gm10653-202ENSMUST00000139570 835 ntBASIC18.57■□□□□ 0.56
Sod1P08228 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.57■□□□□ 0.56
Sod1P08228 Gm5075-201ENSMUST00000196916 622 ntBASIC18.57■□□□□ 0.56
Sod1P08228 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sod1P08228 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.57■□□□□ 0.56
Sod1P08228 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.57■□□□□ 0.56
Sod1P08228 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sod1P08228 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sod1P08228 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sod1P08228 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.57■□□□□ 0.56
Sod1P08228 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.56■□□□□ 0.56
Sod1P08228 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.56■□□□□ 0.56
Sod1P08228 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sod1P08228 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.56■□□□□ 0.56
Sod1P08228 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Sod1P08228 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Sod1P08228 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Sod1P08228 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sod1P08228 Gm6420-201ENSMUST00000193885 723 ntBASIC18.56■□□□□ 0.56
Sod1P08228 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.56■□□□□ 0.56
Sod1P08228 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sod1P08228 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Sod1P08228 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sod1P08228 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sod1P08228 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.56■□□□□ 0.56
Sod1P08228 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sod1P08228 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Sod1P08228 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.55■□□□□ 0.56
Sod1P08228 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sod1P08228 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sod1P08228 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sod1P08228 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sod1P08228 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sod1P08228 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Sod1P08228 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sod1P08228 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sod1P08228 Nespas-201ENSMUST00000143738 1083 ntBASIC18.55■□□□□ 0.56
Sod1P08228 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sod1P08228 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sod1P08228 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sod1P08228 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sod1P08228 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sod1P08228 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.54■□□□□ 0.56
Sod1P08228 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.54■□□□□ 0.56
Sod1P08228 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sod1P08228 Gm6365-201ENSMUST00000054711 744 ntBASIC18.54■□□□□ 0.56
Sod1P08228 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.54■□□□□ 0.56
Sod1P08228 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sod1P08228 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sod1P08228 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sod1P08228 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sod1P08228 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sod1P08228 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sod1P08228 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.53■□□□□ 0.56
Sod1P08228 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sod1P08228 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.53■□□□□ 0.56
Sod1P08228 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Sod1P08228 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sod1P08228 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Sod1P08228 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sod1P08228 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sod1P08228 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.53■□□□□ 0.56
Sod1P08228 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sod1P08228 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sod1P08228 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sod1P08228 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sod1P08228 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sod1P08228 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sod1P08228 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Sod1P08228 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sod1P08228 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Sod1P08228 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sod1P08228 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sod1P08228 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sod1P08228 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.51■□□□□ 0.55
Sod1P08228 Gm12527-201ENSMUST00000117967 564 ntBASIC18.51■□□□□ 0.55
Sod1P08228 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.51■□□□□ 0.55
Sod1P08228 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.51■□□□□ 0.55
Sod1P08228 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.51■□□□□ 0.55
Sod1P08228 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sod1P08228 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sod1P08228 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sod1P08228 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sod1P08228 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sod1P08228 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sod1P08228 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sod1P08228 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.5■□□□□ 0.55
Sod1P08228 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Sod1P08228 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Sod1P08228 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Sod1P08228 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms