Protein–RNA interactions for Protein: P04946

Ig kappa chain V-V region NQ5-89.4, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04946 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
P04946 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
P04946 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.85■□□□□ 0.29
P04946 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
P04946 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.85■□□□□ 0.29
P04946 AV356131-201ENSMUST00000206201 750 ntBASIC16.85■□□□□ 0.29
P04946 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.85■□□□□ 0.29
P04946 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.85■□□□□ 0.29
P04946 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
P04946 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
P04946 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
P04946 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
P04946 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
P04946 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
P04946 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
P04946 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.85■□□□□ 0.29
P04946 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
P04946 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
P04946 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
P04946 Gm13234-201ENSMUST00000120010 747 ntBASIC16.84■□□□□ 0.29
P04946 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
P04946 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
P04946 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.84■□□□□ 0.29
P04946 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
P04946 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.84■□□□□ 0.29
P04946 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
P04946 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.84■□□□□ 0.29
P04946 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
P04946 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
P04946 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
P04946 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.84■□□□□ 0.29
P04946 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
P04946 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
P04946 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
P04946 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
P04946 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.83■□□□□ 0.28
P04946 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
P04946 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
P04946 Reep4-203ENSMUST00000226563 1444 ntBASIC16.83■□□□□ 0.28
P04946 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
P04946 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04946 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04946 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04946 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04946 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.82■□□□□ 0.28
P04946 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.82■□□□□ 0.28
P04946 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04946 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04946 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04946 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04946 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04946 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04946 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04946 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.81■□□□□ 0.28
P04946 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
P04946 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.81■□□□□ 0.28
P04946 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04946 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04946 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04946 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
P04946 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04946 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04946 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
P04946 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
P04946 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
P04946 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
P04946 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.8■□□□□ 0.28
P04946 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
P04946 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
P04946 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P04946 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
P04946 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P04946 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
P04946 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04946 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04946 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
P04946 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04946 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
P04946 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.79■□□□□ 0.28
P04946 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04946 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
P04946 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
P04946 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04946 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.79■□□□□ 0.28
P04946 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
P04946 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04946 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04946 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.79■□□□□ 0.28
P04946 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
P04946 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04946 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
P04946 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
P04946 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.78■□□□□ 0.28
P04946 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P04946 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
P04946 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P04946 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
P04946 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P04946 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P04946 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms