Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.39■□□□□ 0.85
PrnpP04925 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
PrnpP04925 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
PrnpP04925 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.39■□□□□ 0.85
PrnpP04925 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
PrnpP04925 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PrnpP04925 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PrnpP04925 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
PrnpP04925 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PrnpP04925 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
PrnpP04925 AA386476-201ENSMUST00000098781 1665 ntBASIC20.38■□□□□ 0.85
PrnpP04925 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PrnpP04925 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PrnpP04925 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PrnpP04925 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PrnpP04925 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PrnpP04925 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
PrnpP04925 Nespas-201ENSMUST00000143738 1083 ntBASIC20.38■□□□□ 0.85
PrnpP04925 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PrnpP04925 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PrnpP04925 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.38■□□□□ 0.85
PrnpP04925 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PrnpP04925 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PrnpP04925 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PrnpP04925 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PrnpP04925 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.37■□□□□ 0.85
PrnpP04925 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PrnpP04925 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PrnpP04925 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.37■□□□□ 0.85
PrnpP04925 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PrnpP04925 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.37■□□□□ 0.85
PrnpP04925 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PrnpP04925 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PrnpP04925 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.36■□□□□ 0.85
PrnpP04925 Gm6365-201ENSMUST00000054711 744 ntBASIC20.36■□□□□ 0.85
PrnpP04925 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.36■□□□□ 0.85
PrnpP04925 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PrnpP04925 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PrnpP04925 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PrnpP04925 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PrnpP04925 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PrnpP04925 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PrnpP04925 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PrnpP04925 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PrnpP04925 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
PrnpP04925 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
PrnpP04925 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.35■□□□□ 0.85
PrnpP04925 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.35■□□□□ 0.85
PrnpP04925 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.35■□□□□ 0.85
PrnpP04925 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PrnpP04925 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
PrnpP04925 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PrnpP04925 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.35■□□□□ 0.85
PrnpP04925 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PrnpP04925 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PrnpP04925 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PrnpP04925 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PrnpP04925 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.34■□□□□ 0.85
PrnpP04925 Gm10653-202ENSMUST00000139570 835 ntBASIC20.34■□□□□ 0.85
PrnpP04925 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PrnpP04925 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PrnpP04925 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.34■□□□□ 0.85
PrnpP04925 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PrnpP04925 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PrnpP04925 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PrnpP04925 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PrnpP04925 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PrnpP04925 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PrnpP04925 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PrnpP04925 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
PrnpP04925 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.33■□□□□ 0.85
PrnpP04925 Gm6420-201ENSMUST00000193885 723 ntBASIC20.33■□□□□ 0.85
PrnpP04925 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
PrnpP04925 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
PrnpP04925 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PrnpP04925 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
PrnpP04925 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PrnpP04925 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PrnpP04925 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PrnpP04925 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PrnpP04925 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PrnpP04925 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.33■□□□□ 0.84
PrnpP04925 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PrnpP04925 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PrnpP04925 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PrnpP04925 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PrnpP04925 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PrnpP04925 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PrnpP04925 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PrnpP04925 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PrnpP04925 Gm13148-201ENSMUST00000118892 745 ntBASIC20.32■□□□□ 0.84
PrnpP04925 Gm13534-201ENSMUST00000121169 513 ntBASIC20.32■□□□□ 0.84
PrnpP04925 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PrnpP04925 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PrnpP04925 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PrnpP04925 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PrnpP04925 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.32■□□□□ 0.84
PrnpP04925 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.31■□□□□ 0.84
PrnpP04925 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PrnpP04925 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 114.7 ms