Protein–RNA interactions for Protein: P04756

Chrna1, Acetylcholine receptor subunit alpha, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna1P04756 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chrna1P04756 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Chrna1P04756 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.15■□□□□ 0.98
Chrna1P04756 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.15■□□□□ 0.98
Chrna1P04756 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Chrna1P04756 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chrna1P04756 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chrna1P04756 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chrna1P04756 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chrna1P04756 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.14■□□□□ 0.98
Chrna1P04756 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chrna1P04756 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.14■□□□□ 0.97
Chrna1P04756 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chrna1P04756 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.13■□□□□ 0.97
Chrna1P04756 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.13■□□□□ 0.97
Chrna1P04756 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.13■□□□□ 0.97
Chrna1P04756 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Chrna1P04756 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chrna1P04756 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chrna1P04756 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.13■□□□□ 0.97
Chrna1P04756 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chrna1P04756 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chrna1P04756 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chrna1P04756 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chrna1P04756 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chrna1P04756 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Chrna1P04756 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chrna1P04756 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chrna1P04756 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chrna1P04756 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chrna1P04756 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.11■□□□□ 0.97
Chrna1P04756 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chrna1P04756 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.11■□□□□ 0.97
Chrna1P04756 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chrna1P04756 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Chrna1P04756 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.11■□□□□ 0.97
Chrna1P04756 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chrna1P04756 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Chrna1P04756 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chrna1P04756 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chrna1P04756 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chrna1P04756 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chrna1P04756 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Chrna1P04756 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chrna1P04756 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chrna1P04756 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chrna1P04756 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Chrna1P04756 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.1■□□□□ 0.97
Chrna1P04756 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Chrna1P04756 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Chrna1P04756 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chrna1P04756 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Chrna1P04756 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chrna1P04756 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Chrna1P04756 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Chrna1P04756 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Chrna1P04756 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.09■□□□□ 0.97
Chrna1P04756 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.09■□□□□ 0.97
Chrna1P04756 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chrna1P04756 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chrna1P04756 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.09■□□□□ 0.97
Chrna1P04756 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chrna1P04756 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chrna1P04756 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chrna1P04756 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chrna1P04756 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chrna1P04756 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Chrna1P04756 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Chrna1P04756 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.08■□□□□ 0.97
Chrna1P04756 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Chrna1P04756 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chrna1P04756 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chrna1P04756 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chrna1P04756 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.07■□□□□ 0.96
Chrna1P04756 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chrna1P04756 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chrna1P04756 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Chrna1P04756 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.07■□□□□ 0.96
Chrna1P04756 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Chrna1P04756 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Chrna1P04756 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chrna1P04756 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chrna1P04756 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chrna1P04756 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.07■□□□□ 0.96
Chrna1P04756 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
Chrna1P04756 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chrna1P04756 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Chrna1P04756 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Chrna1P04756 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Chrna1P04756 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.06■□□□□ 0.96
Chrna1P04756 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Chrna1P04756 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chrna1P04756 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chrna1P04756 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Chrna1P04756 Gm38205-201ENSMUST00000192243 258 ntBASIC21.05■□□□□ 0.96
Chrna1P04756 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.05■□□□□ 0.96
Chrna1P04756 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.05■□□□□ 0.96
Chrna1P04756 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Chrna1P04756 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chrna1P04756 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms