Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm12527-201ENSMUST00000117967 564 ntBASIC24.48■■□□□ 1.51
Col4a1P02463 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC24.48■■□□□ 1.51
Col4a1P02463 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Col4a1P02463 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC24.48■■□□□ 1.51
Col4a1P02463 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Col4a1P02463 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
Col4a1P02463 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Col4a1P02463 Nespas-201ENSMUST00000143738 1083 ntBASIC24.47■■□□□ 1.51
Col4a1P02463 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Col4a1P02463 Mir5133-201ENSMUST00000174955 77 ntBASIC24.47■■□□□ 1.51
Col4a1P02463 Gm6420-201ENSMUST00000193885 723 ntBASIC24.47■■□□□ 1.51
Col4a1P02463 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Col4a1P02463 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC24.47■■□□□ 1.51
Col4a1P02463 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Col4a1P02463 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC24.46■■□□□ 1.51
Col4a1P02463 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Col4a1P02463 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Col4a1P02463 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Col4a1P02463 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Col4a1P02463 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Col4a1P02463 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC24.46■■□□□ 1.51
Col4a1P02463 AC154266.1-201ENSMUST00000223190 503 ntBASIC24.46■■□□□ 1.51
Col4a1P02463 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Col4a1P02463 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Col4a1P02463 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Col4a1P02463 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Col4a1P02463 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC24.45■■□□□ 1.5
Col4a1P02463 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC24.45■■□□□ 1.5
Col4a1P02463 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Col4a1P02463 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Col4a1P02463 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC24.44■■□□□ 1.5
Col4a1P02463 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Col4a1P02463 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Col4a1P02463 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC24.44■■□□□ 1.5
Col4a1P02463 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC24.44■■□□□ 1.5
Col4a1P02463 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Col4a1P02463 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Col4a1P02463 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC24.43■■□□□ 1.5
Col4a1P02463 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Col4a1P02463 Gm13534-201ENSMUST00000121169 513 ntBASIC24.43■■□□□ 1.5
Col4a1P02463 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Col4a1P02463 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Col4a1P02463 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Col4a1P02463 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC24.43■■□□□ 1.5
Col4a1P02463 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Col4a1P02463 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Col4a1P02463 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC24.43■■□□□ 1.5
Col4a1P02463 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Col4a1P02463 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Col4a1P02463 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Col4a1P02463 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Col4a1P02463 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC24.42■■□□□ 1.5
Col4a1P02463 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Col4a1P02463 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Col4a1P02463 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Col4a1P02463 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
Col4a1P02463 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC24.41■■□□□ 1.5
Col4a1P02463 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
Col4a1P02463 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Col4a1P02463 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Col4a1P02463 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Col4a1P02463 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Col4a1P02463 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col4a1P02463 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col4a1P02463 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col4a1P02463 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Col4a1P02463 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col4a1P02463 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Col4a1P02463 Gm10655-201ENSMUST00000098658 1397 ntBASIC24.4■■□□□ 1.5
Col4a1P02463 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC24.4■■□□□ 1.5
Col4a1P02463 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
Col4a1P02463 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Col4a1P02463 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC24.39■■□□□ 1.5
Col4a1P02463 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
Col4a1P02463 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC24.39■■□□□ 1.49
Col4a1P02463 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Col4a1P02463 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Col4a1P02463 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC24.38■■□□□ 1.49
Col4a1P02463 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Col4a1P02463 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Col4a1P02463 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Col4a1P02463 AA386476-201ENSMUST00000098781 1665 ntBASIC24.38■■□□□ 1.49
Col4a1P02463 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC24.37■■□□□ 1.49
Col4a1P02463 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Col4a1P02463 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
Col4a1P02463 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Col4a1P02463 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Col4a1P02463 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC24.37■■□□□ 1.49
Col4a1P02463 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Col4a1P02463 AC152827.1-201ENSMUST00000221143 2189 ntBASIC24.36■■□□□ 1.49
Col4a1P02463 Gm15043-201ENSMUST00000118843 1543 ntBASIC24.36■■□□□ 1.49
Col4a1P02463 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Col4a1P02463 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Col4a1P02463 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Col4a1P02463 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC24.35■■□□□ 1.49
Col4a1P02463 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Col4a1P02463 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC24.35■■□□□ 1.49
Col4a1P02463 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Col4a1P02463 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Col4a1P02463 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms