Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
H3f3cP02301 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
H3f3cP02301 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.72■□□□□ 0.27
H3f3cP02301 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
H3f3cP02301 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
H3f3cP02301 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
H3f3cP02301 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
H3f3cP02301 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.72■□□□□ 0.27
H3f3cP02301 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
H3f3cP02301 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
H3f3cP02301 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
H3f3cP02301 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
H3f3cP02301 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
H3f3cP02301 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
H3f3cP02301 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
H3f3cP02301 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
H3f3cP02301 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.71■□□□□ 0.27
H3f3cP02301 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
H3f3cP02301 Mir7075-201ENSMUST00000184187 82 ntBASIC16.71■□□□□ 0.27
H3f3cP02301 Gm45417-201ENSMUST00000209533 758 ntBASIC16.71■□□□□ 0.27
H3f3cP02301 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
H3f3cP02301 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
H3f3cP02301 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
H3f3cP02301 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
H3f3cP02301 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.71■□□□□ 0.27
H3f3cP02301 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
H3f3cP02301 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
H3f3cP02301 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
H3f3cP02301 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
H3f3cP02301 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
H3f3cP02301 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
H3f3cP02301 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
H3f3cP02301 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
H3f3cP02301 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.7■□□□□ 0.26
H3f3cP02301 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
H3f3cP02301 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
H3f3cP02301 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
H3f3cP02301 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
H3f3cP02301 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
H3f3cP02301 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H3f3cP02301 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H3f3cP02301 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
H3f3cP02301 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H3f3cP02301 Gm12251-201ENSMUST00000117893 792 ntBASIC16.69■□□□□ 0.26
H3f3cP02301 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.69■□□□□ 0.26
H3f3cP02301 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
H3f3cP02301 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H3f3cP02301 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
H3f3cP02301 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.68■□□□□ 0.26
H3f3cP02301 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
H3f3cP02301 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
H3f3cP02301 Gm6139-201ENSMUST00000079261 882 ntBASIC16.68■□□□□ 0.26
H3f3cP02301 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
H3f3cP02301 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
H3f3cP02301 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
H3f3cP02301 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
H3f3cP02301 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
H3f3cP02301 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
H3f3cP02301 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
H3f3cP02301 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.68■□□□□ 0.26
H3f3cP02301 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H3f3cP02301 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H3f3cP02301 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H3f3cP02301 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
H3f3cP02301 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H3f3cP02301 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H3f3cP02301 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H3f3cP02301 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
H3f3cP02301 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H3f3cP02301 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.67■□□□□ 0.26
H3f3cP02301 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.67■□□□□ 0.26
H3f3cP02301 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H3f3cP02301 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
H3f3cP02301 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
H3f3cP02301 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.67■□□□□ 0.26
H3f3cP02301 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
H3f3cP02301 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
H3f3cP02301 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H3f3cP02301 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H3f3cP02301 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H3f3cP02301 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H3f3cP02301 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H3f3cP02301 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
H3f3cP02301 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
H3f3cP02301 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H3f3cP02301 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H3f3cP02301 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
H3f3cP02301 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
H3f3cP02301 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H3f3cP02301 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
H3f3cP02301 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.65■□□□□ 0.26
H3f3cP02301 Gm43173-201ENSMUST00000202246 593 ntBASIC16.65■□□□□ 0.26
H3f3cP02301 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H3f3cP02301 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H3f3cP02301 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
H3f3cP02301 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H3f3cP02301 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H3f3cP02301 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H3f3cP02301 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.64■□□□□ 0.25
H3f3cP02301 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms