Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
P01852 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
P01852 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
P01852 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
P01852 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.83■□□□□ 0.45
P01852 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
P01852 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
P01852 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
P01852 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
P01852 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
P01852 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
P01852 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.83■□□□□ 0.44
P01852 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
P01852 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
P01852 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
P01852 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
P01852 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
P01852 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
P01852 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
P01852 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
P01852 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.82■□□□□ 0.44
P01852 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
P01852 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
P01852 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.82■□□□□ 0.44
P01852 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.82■□□□□ 0.44
P01852 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
P01852 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
P01852 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
P01852 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
P01852 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
P01852 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
P01852 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
P01852 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.81■□□□□ 0.44
P01852 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
P01852 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
P01852 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
P01852 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
P01852 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.81■□□□□ 0.44
P01852 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
P01852 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
P01852 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
P01852 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
P01852 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
P01852 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
P01852 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
P01852 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
P01852 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
P01852 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
P01852 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
P01852 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.8■□□□□ 0.44
P01852 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
P01852 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
P01852 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.8■□□□□ 0.44
P01852 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
P01852 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P01852 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
P01852 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P01852 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.79■□□□□ 0.44
P01852 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P01852 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
P01852 Smad6-203ENSMUST00000179458 273 ntBASIC17.79■□□□□ 0.44
P01852 Gm26833-201ENSMUST00000180899 440 ntBASIC17.79■□□□□ 0.44
P01852 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P01852 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
P01852 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
P01852 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.79■□□□□ 0.44
P01852 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.79■□□□□ 0.44
P01852 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
P01852 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
P01852 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
P01852 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.78■□□□□ 0.44
P01852 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
P01852 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
P01852 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.78■□□□□ 0.44
P01852 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
P01852 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
P01852 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
P01852 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
P01852 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
P01852 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
P01852 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
P01852 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
P01852 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
P01852 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
P01852 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.77■□□□□ 0.44
P01852 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
P01852 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
P01852 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
P01852 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
P01852 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.77■□□□□ 0.43
P01852 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
P01852 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
P01852 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
P01852 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P01852 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P01852 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.76■□□□□ 0.43
P01852 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
P01852 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
P01852 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
P01852 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms