Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TcraP01849 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TcraP01849 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TcraP01849 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TcraP01849 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC14.23□□□□□ -0.13
TcraP01849 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC14.23□□□□□ -0.13
TcraP01849 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TcraP01849 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TcraP01849 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.23□□□□□ -0.13
TcraP01849 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC14.23□□□□□ -0.13
TcraP01849 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TcraP01849 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TcraP01849 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TcraP01849 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TcraP01849 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC14.22□□□□□ -0.13
TcraP01849 Gm12366-201ENSMUST00000121722 873 ntBASIC14.22□□□□□ -0.13
TcraP01849 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC14.22□□□□□ -0.13
TcraP01849 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TcraP01849 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TcraP01849 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC14.22□□□□□ -0.13
TcraP01849 Gm5786-201ENSMUST00000085368 882 ntBASIC14.22□□□□□ -0.13
TcraP01849 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TcraP01849 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TcraP01849 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC14.22□□□□□ -0.13
TcraP01849 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TcraP01849 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TcraP01849 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TcraP01849 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TcraP01849 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TcraP01849 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TcraP01849 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TcraP01849 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TcraP01849 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TcraP01849 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC14.21□□□□□ -0.13
TcraP01849 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TcraP01849 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TcraP01849 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TcraP01849 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TcraP01849 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TcraP01849 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TcraP01849 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
TcraP01849 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TcraP01849 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
TcraP01849 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC14.2□□□□□ -0.14
TcraP01849 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
TcraP01849 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TcraP01849 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TcraP01849 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TcraP01849 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TcraP01849 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TcraP01849 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TcraP01849 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TcraP01849 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TcraP01849 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TcraP01849 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TcraP01849 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TcraP01849 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TcraP01849 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TcraP01849 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TcraP01849 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TcraP01849 Gm10420-201ENSMUST00000121713 882 ntBASIC14.19□□□□□ -0.14
TcraP01849 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TcraP01849 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TcraP01849 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TcraP01849 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TcraP01849 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TcraP01849 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TcraP01849 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TcraP01849 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TcraP01849 Gm43909-201ENSMUST00000203443 1876 ntBASIC14.18□□□□□ -0.14
TcraP01849 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TcraP01849 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TcraP01849 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TcraP01849 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TcraP01849 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TcraP01849 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TcraP01849 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TcraP01849 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.18□□□□□ -0.14
TcraP01849 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.18□□□□□ -0.14
TcraP01849 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TcraP01849 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TcraP01849 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TcraP01849 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TcraP01849 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TcraP01849 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TcraP01849 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TcraP01849 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TcraP01849 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TcraP01849 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TcraP01849 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TcraP01849 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TcraP01849 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TcraP01849 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TcraP01849 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.17□□□□□ -0.14
TcraP01849 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
TcraP01849 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC14.17□□□□□ -0.14
TcraP01849 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TcraP01849 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TcraP01849 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TcraP01849 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms