Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac3O88895 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac3O88895 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Hdac3O88895 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac3O88895 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac3O88895 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac3O88895 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac3O88895 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Hdac3O88895 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Hdac3O88895 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hdac3O88895 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hdac3O88895 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hdac3O88895 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hdac3O88895 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Hdac3O88895 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.37■□□□□ 0.37
Hdac3O88895 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Hdac3O88895 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hdac3O88895 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.37■□□□□ 0.37
Hdac3O88895 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hdac3O88895 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hdac3O88895 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hdac3O88895 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hdac3O88895 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.36■□□□□ 0.37
Hdac3O88895 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hdac3O88895 Golgb1-201ENSMUST00000023534 498 ntBASIC17.36■□□□□ 0.37
Hdac3O88895 Gm9847-201ENSMUST00000052528 599 ntBASIC17.36■□□□□ 0.37
Hdac3O88895 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hdac3O88895 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hdac3O88895 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Hdac3O88895 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Hdac3O88895 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.36■□□□□ 0.37
Hdac3O88895 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Hdac3O88895 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hdac3O88895 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hdac3O88895 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hdac3O88895 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hdac3O88895 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hdac3O88895 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hdac3O88895 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.35■□□□□ 0.37
Hdac3O88895 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hdac3O88895 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hdac3O88895 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hdac3O88895 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hdac3O88895 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hdac3O88895 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Hdac3O88895 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hdac3O88895 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hdac3O88895 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hdac3O88895 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.34■□□□□ 0.37
Hdac3O88895 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hdac3O88895 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.34■□□□□ 0.37
Hdac3O88895 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Hdac3O88895 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hdac3O88895 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Hdac3O88895 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hdac3O88895 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hdac3O88895 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hdac3O88895 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.33■□□□□ 0.36
Hdac3O88895 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hdac3O88895 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hdac3O88895 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hdac3O88895 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hdac3O88895 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hdac3O88895 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac3O88895 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac3O88895 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac3O88895 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac3O88895 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Hdac3O88895 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac3O88895 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac3O88895 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac3O88895 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac3O88895 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Hdac3O88895 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac3O88895 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac3O88895 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hdac3O88895 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac3O88895 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac3O88895 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.31■□□□□ 0.36
Hdac3O88895 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.31■□□□□ 0.36
Hdac3O88895 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Hdac3O88895 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Hdac3O88895 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.31■□□□□ 0.36
Hdac3O88895 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.31■□□□□ 0.36
Hdac3O88895 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac3O88895 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac3O88895 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac3O88895 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.31■□□□□ 0.36
Hdac3O88895 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Hdac3O88895 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac3O88895 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac3O88895 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac3O88895 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Hdac3O88895 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac3O88895 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac3O88895 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac3O88895 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac3O88895 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac3O88895 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac3O88895 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms