Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh2d1aO88890 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sh2d1aO88890 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC13.78□□□□□ -0.2
Sh2d1aO88890 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh2d1aO88890 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh2d1aO88890 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh2d1aO88890 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh2d1aO88890 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Sh2d1aO88890 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh2d1aO88890 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC13.77□□□□□ -0.2
Sh2d1aO88890 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Sh2d1aO88890 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sh2d1aO88890 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Sh2d1aO88890 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC13.77□□□□□ -0.21
Sh2d1aO88890 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sh2d1aO88890 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Sh2d1aO88890 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sh2d1aO88890 Mir6236-201ENSMUST00000184437 123 ntBASIC13.77□□□□□ -0.21
Sh2d1aO88890 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sh2d1aO88890 Gm43909-201ENSMUST00000203443 1876 ntBASIC13.77□□□□□ -0.21
Sh2d1aO88890 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC13.77□□□□□ -0.21
Sh2d1aO88890 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sh2d1aO88890 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sh2d1aO88890 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sh2d1aO88890 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Sh2d1aO88890 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sh2d1aO88890 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Sh2d1aO88890 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sh2d1aO88890 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sh2d1aO88890 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sh2d1aO88890 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sh2d1aO88890 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sh2d1aO88890 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC13.76□□□□□ -0.21
Sh2d1aO88890 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sh2d1aO88890 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Sh2d1aO88890 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sh2d1aO88890 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sh2d1aO88890 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC13.76□□□□□ -0.21
Sh2d1aO88890 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sh2d1aO88890 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sh2d1aO88890 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sh2d1aO88890 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Sh2d1aO88890 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sh2d1aO88890 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC13.75□□□□□ -0.21
Sh2d1aO88890 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sh2d1aO88890 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sh2d1aO88890 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC13.75□□□□□ -0.21
Sh2d1aO88890 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sh2d1aO88890 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Sh2d1aO88890 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC13.75□□□□□ -0.21
Sh2d1aO88890 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sh2d1aO88890 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sh2d1aO88890 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sh2d1aO88890 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Sh2d1aO88890 AC122335.2-201ENSMUST00000213901 6181 ntBASIC13.75□□□□□ -0.21
Sh2d1aO88890 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC13.74□□□□□ -0.21
Sh2d1aO88890 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sh2d1aO88890 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sh2d1aO88890 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sh2d1aO88890 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sh2d1aO88890 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Sh2d1aO88890 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC13.74□□□□□ -0.21
Sh2d1aO88890 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC13.74□□□□□ -0.21
Sh2d1aO88890 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Sh2d1aO88890 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sh2d1aO88890 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sh2d1aO88890 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sh2d1aO88890 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sh2d1aO88890 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Sh2d1aO88890 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sh2d1aO88890 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
Sh2d1aO88890 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sh2d1aO88890 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh2d1aO88890 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sh2d1aO88890 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh2d1aO88890 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh2d1aO88890 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
Sh2d1aO88890 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sh2d1aO88890 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sh2d1aO88890 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC13.73□□□□□ -0.21
Sh2d1aO88890 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh2d1aO88890 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sh2d1aO88890 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC13.73□□□□□ -0.21
Sh2d1aO88890 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC13.73□□□□□ -0.21
Sh2d1aO88890 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh2d1aO88890 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sh2d1aO88890 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Sh2d1aO88890 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh2d1aO88890 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sh2d1aO88890 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh2d1aO88890 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Sh2d1aO88890 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh2d1aO88890 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC13.72□□□□□ -0.21
Sh2d1aO88890 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh2d1aO88890 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh2d1aO88890 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh2d1aO88890 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Sh2d1aO88890 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Sh2d1aO88890 Krt8-ps-201ENSMUST00000208495 945 ntBASIC13.72□□□□□ -0.21
Sh2d1aO88890 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms