Protein–RNA interactions for Protein: O88888

Apba3, Amyloid-beta A4 precursor protein-binding family A member 3, mousemouse

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apba3O88888 AV356131-201ENSMUST00000206201 750 ntBASIC21.47■■□□□ 1.03
Apba3O88888 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Apba3O88888 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.47■■□□□ 1.03
Apba3O88888 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Apba3O88888 AA386476-201ENSMUST00000098781 1665 ntBASIC21.47■■□□□ 1.03
Apba3O88888 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.47■■□□□ 1.03
Apba3O88888 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Apba3O88888 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Apba3O88888 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.46■■□□□ 1.03
Apba3O88888 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.46■■□□□ 1.03
Apba3O88888 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Apba3O88888 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Apba3O88888 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Apba3O88888 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.45■■□□□ 1.02
Apba3O88888 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Apba3O88888 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Apba3O88888 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Apba3O88888 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Apba3O88888 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Apba3O88888 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Apba3O88888 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Apba3O88888 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Apba3O88888 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Apba3O88888 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Apba3O88888 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Apba3O88888 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Apba3O88888 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.44■■□□□ 1.02
Apba3O88888 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Apba3O88888 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Apba3O88888 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Apba3O88888 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Apba3O88888 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Apba3O88888 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Apba3O88888 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Apba3O88888 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.44■■□□□ 1.02
Apba3O88888 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Apba3O88888 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Apba3O88888 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Apba3O88888 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Apba3O88888 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Apba3O88888 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.43■■□□□ 1.02
Apba3O88888 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Apba3O88888 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Apba3O88888 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.43■■□□□ 1.02
Apba3O88888 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.43■■□□□ 1.02
Apba3O88888 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Apba3O88888 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Apba3O88888 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Apba3O88888 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.42■■□□□ 1.02
Apba3O88888 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Apba3O88888 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Apba3O88888 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Apba3O88888 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.42■■□□□ 1.02
Apba3O88888 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Apba3O88888 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.42■■□□□ 1.02
Apba3O88888 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Apba3O88888 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Apba3O88888 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Apba3O88888 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Apba3O88888 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Apba3O88888 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Apba3O88888 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Apba3O88888 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Apba3O88888 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Apba3O88888 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Apba3O88888 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Apba3O88888 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.41■■□□□ 1.02
Apba3O88888 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.41■■□□□ 1.02
Apba3O88888 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.41■■□□□ 1.02
Apba3O88888 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Apba3O88888 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
Apba3O88888 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Apba3O88888 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Apba3O88888 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Apba3O88888 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Apba3O88888 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Apba3O88888 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Apba3O88888 Gm13234-201ENSMUST00000120010 747 ntBASIC21.4■■□□□ 1.02
Apba3O88888 Gm37179-201ENSMUST00000194862 823 ntBASIC21.4■■□□□ 1.02
Apba3O88888 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.4■■□□□ 1.02
Apba3O88888 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Apba3O88888 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Apba3O88888 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Apba3O88888 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Apba3O88888 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Apba3O88888 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Apba3O88888 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.39■■□□□ 1.01
Apba3O88888 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Apba3O88888 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Apba3O88888 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Apba3O88888 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Apba3O88888 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Apba3O88888 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Apba3O88888 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.38■■□□□ 1.01
Apba3O88888 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.38■■□□□ 1.01
Apba3O88888 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Apba3O88888 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.38■■□□□ 1.01
Apba3O88888 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Apba3O88888 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.38■■□□□ 1.01
Apba3O88888 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.38■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms