Protein–RNA interactions for Protein: O88685

Psmc3, 26S proteasome regulatory subunit 6A, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc3O88685 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Psmc3O88685 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.64■□□□□ 0.89
Psmc3O88685 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Psmc3O88685 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Psmc3O88685 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
Psmc3O88685 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Psmc3O88685 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Psmc3O88685 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Psmc3O88685 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Psmc3O88685 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.62■□□□□ 0.89
Psmc3O88685 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Psmc3O88685 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Psmc3O88685 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Psmc3O88685 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Psmc3O88685 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.62■□□□□ 0.89
Psmc3O88685 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.62■□□□□ 0.89
Psmc3O88685 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Psmc3O88685 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Psmc3O88685 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Psmc3O88685 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Psmc3O88685 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Psmc3O88685 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Psmc3O88685 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Psmc3O88685 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Psmc3O88685 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Psmc3O88685 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Psmc3O88685 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Psmc3O88685 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Psmc3O88685 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Psmc3O88685 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Psmc3O88685 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Psmc3O88685 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Psmc3O88685 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Psmc3O88685 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Psmc3O88685 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Psmc3O88685 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Psmc3O88685 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.6■□□□□ 0.89
Psmc3O88685 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Psmc3O88685 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Psmc3O88685 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Psmc3O88685 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Psmc3O88685 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Psmc3O88685 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Psmc3O88685 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Psmc3O88685 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Psmc3O88685 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Psmc3O88685 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Psmc3O88685 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Psmc3O88685 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Psmc3O88685 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.59■□□□□ 0.89
Psmc3O88685 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Psmc3O88685 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Psmc3O88685 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Psmc3O88685 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Psmc3O88685 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.58■□□□□ 0.89
Psmc3O88685 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Psmc3O88685 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.58■□□□□ 0.89
Psmc3O88685 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Psmc3O88685 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Psmc3O88685 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Psmc3O88685 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Psmc3O88685 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Psmc3O88685 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
Psmc3O88685 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Psmc3O88685 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Psmc3O88685 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Psmc3O88685 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Psmc3O88685 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Psmc3O88685 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Psmc3O88685 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Psmc3O88685 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Psmc3O88685 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Psmc3O88685 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.56■□□□□ 0.88
Psmc3O88685 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Psmc3O88685 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Psmc3O88685 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Psmc3O88685 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Psmc3O88685 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Psmc3O88685 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Psmc3O88685 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Psmc3O88685 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Psmc3O88685 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Psmc3O88685 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Psmc3O88685 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Psmc3O88685 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Psmc3O88685 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.55■□□□□ 0.88
Psmc3O88685 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.55■□□□□ 0.88
Psmc3O88685 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Psmc3O88685 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Psmc3O88685 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Psmc3O88685 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Psmc3O88685 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Psmc3O88685 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Psmc3O88685 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Psmc3O88685 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Psmc3O88685 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.54■□□□□ 0.88
Psmc3O88685 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Psmc3O88685 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.54■□□□□ 0.88
Psmc3O88685 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.54■□□□□ 0.88
Psmc3O88685 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms