Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc28a2O88627 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc28a2O88627 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc28a2O88627 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Slc28a2O88627 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Slc28a2O88627 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc28a2O88627 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Slc28a2O88627 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Slc28a2O88627 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Slc28a2O88627 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
Slc28a2O88627 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc28a2O88627 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Slc28a2O88627 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc28a2O88627 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Slc28a2O88627 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc28a2O88627 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc28a2O88627 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc28a2O88627 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.31■□□□□ 0.36
Slc28a2O88627 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc28a2O88627 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc28a2O88627 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc28a2O88627 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc28a2O88627 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc28a2O88627 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.3■□□□□ 0.36
Slc28a2O88627 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.3■□□□□ 0.36
Slc28a2O88627 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc28a2O88627 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Slc28a2O88627 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.3■□□□□ 0.36
Slc28a2O88627 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc28a2O88627 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc28a2O88627 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Slc28a2O88627 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc28a2O88627 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc28a2O88627 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc28a2O88627 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc28a2O88627 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc28a2O88627 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc28a2O88627 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.29■□□□□ 0.36
Slc28a2O88627 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Slc28a2O88627 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc28a2O88627 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.29■□□□□ 0.36
Slc28a2O88627 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc28a2O88627 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc28a2O88627 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc28a2O88627 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc28a2O88627 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Slc28a2O88627 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc28a2O88627 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc28a2O88627 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc28a2O88627 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc28a2O88627 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc28a2O88627 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc28a2O88627 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc28a2O88627 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Slc28a2O88627 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.28■□□□□ 0.36
Slc28a2O88627 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
Slc28a2O88627 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.28■□□□□ 0.36
Slc28a2O88627 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc28a2O88627 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Slc28a2O88627 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc28a2O88627 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Slc28a2O88627 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc28a2O88627 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
Slc28a2O88627 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc28a2O88627 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.28■□□□□ 0.36
Slc28a2O88627 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Slc28a2O88627 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.27■□□□□ 0.36
Slc28a2O88627 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Slc28a2O88627 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
Slc28a2O88627 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.27■□□□□ 0.36
Slc28a2O88627 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc28a2O88627 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Slc28a2O88627 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc28a2O88627 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc28a2O88627 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc28a2O88627 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Slc28a2O88627 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc28a2O88627 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc28a2O88627 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc28a2O88627 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Slc28a2O88627 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc28a2O88627 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc28a2O88627 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc28a2O88627 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.26■□□□□ 0.35
Slc28a2O88627 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc28a2O88627 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc28a2O88627 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc28a2O88627 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc28a2O88627 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc28a2O88627 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slc28a2O88627 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc28a2O88627 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Slc28a2O88627 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc28a2O88627 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc28a2O88627 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc28a2O88627 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc28a2O88627 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc28a2O88627 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.25■□□□□ 0.35
Slc28a2O88627 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc28a2O88627 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms