Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm10139O88245 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm10139O88245 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm10139O88245 Gm20100-201ENSMUST00000209418 2272 ntBASIC11.93□□□□□ -0.5
Gm10139O88245 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gm10139O88245 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm10139O88245 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm10139O88245 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm10139O88245 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm10139O88245 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Gm10139O88245 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Gm10139O88245 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC11.92□□□□□ -0.5
Gm10139O88245 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm10139O88245 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC11.92□□□□□ -0.5
Gm10139O88245 Gm43759-201ENSMUST00000196925 1261 ntBASIC11.92□□□□□ -0.5
Gm10139O88245 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC11.92□□□□□ -0.5
Gm10139O88245 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Gm10139O88245 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm10139O88245 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm10139O88245 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Gm10139O88245 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm10139O88245 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm10139O88245 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm10139O88245 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm10139O88245 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Gm10139O88245 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm10139O88245 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm10139O88245 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm10139O88245 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Gm10139O88245 Gm9959-201ENSMUST00000068277 390 ntBASIC11.91□□□□□ -0.5
Gm10139O88245 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gm10139O88245 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Gm10139O88245 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm10139O88245 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm10139O88245 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm10139O88245 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Gm10139O88245 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm10139O88245 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm10139O88245 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm10139O88245 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC11.91□□□□□ -0.5
Gm10139O88245 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm10139O88245 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm10139O88245 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC11.9□□□□□ -0.5
Gm10139O88245 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm10139O88245 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Gm10139O88245 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm10139O88245 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm10139O88245 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm10139O88245 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC11.9□□□□□ -0.5
Gm10139O88245 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm10139O88245 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Gm10139O88245 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Gm10139O88245 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm10139O88245 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Gm10139O88245 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Gm10139O88245 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Gm10139O88245 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Gm10139O88245 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm10139O88245 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Gm10139O88245 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm10139O88245 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm10139O88245 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm10139O88245 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm10139O88245 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm10139O88245 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Gm10139O88245 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC11.89□□□□□ -0.51
Gm10139O88245 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC11.89□□□□□ -0.51
Gm10139O88245 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC11.89□□□□□ -0.51
Gm10139O88245 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm10139O88245 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Gm10139O88245 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm10139O88245 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm10139O88245 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm10139O88245 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm10139O88245 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC11.88□□□□□ -0.51
Gm10139O88245 Gm5112-201ENSMUST00000204407 2368 ntBASIC11.88□□□□□ -0.51
Gm10139O88245 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC11.88□□□□□ -0.51
Gm10139O88245 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC11.88□□□□□ -0.51
Gm10139O88245 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm10139O88245 Gm45640-201ENSMUST00000210665 1896 ntBASIC11.88□□□□□ -0.51
Gm10139O88245 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Gm10139O88245 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm10139O88245 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm10139O88245 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm10139O88245 AC126028.2-201ENSMUST00000228100 1833 ntBASIC11.88□□□□□ -0.51
Gm10139O88245 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10139O88245 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10139O88245 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC11.87□□□□□ -0.51
Gm10139O88245 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Gm10139O88245 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10139O88245 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10139O88245 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10139O88245 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10139O88245 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC11.87□□□□□ -0.51
Gm10139O88245 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC11.87□□□□□ -0.51
Gm10139O88245 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm10139O88245 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Gm10139O88245 AC154266.1-201ENSMUST00000223190 503 ntBASIC11.87□□□□□ -0.51
Gm10139O88245 AC124603.1-201ENSMUST00000223843 308 ntBASIC11.87□□□□□ -0.51
Gm10139O88245 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms