Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ubr1O70481 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
Ubr1O70481 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC25.85■■□□□ 1.73
Ubr1O70481 AA386476-201ENSMUST00000098781 1665 ntBASIC25.85■■□□□ 1.73
Ubr1O70481 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
Ubr1O70481 Cdkn3-203ENSMUST00000227149 1952 ntBASIC25.85■■□□□ 1.73
Ubr1O70481 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Ubr1O70481 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Ubr1O70481 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
Ubr1O70481 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Ubr1O70481 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Ubr1O70481 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC25.84■■□□□ 1.73
Ubr1O70481 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Ubr1O70481 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Ubr1O70481 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
Ubr1O70481 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Ubr1O70481 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC25.83■■□□□ 1.73
Ubr1O70481 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Ubr1O70481 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.72
Ubr1O70481 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC25.83■■□□□ 1.72
Ubr1O70481 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC25.82■■□□□ 1.72
Ubr1O70481 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ubr1O70481 AC152827.1-201ENSMUST00000221143 2189 ntBASIC25.82■■□□□ 1.72
Ubr1O70481 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Ubr1O70481 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
Ubr1O70481 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ubr1O70481 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC25.82■■□□□ 1.72
Ubr1O70481 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ubr1O70481 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ubr1O70481 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
Ubr1O70481 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC25.81■■□□□ 1.72
Ubr1O70481 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
Ubr1O70481 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
Ubr1O70481 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
Ubr1O70481 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ubr1O70481 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ubr1O70481 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC25.8■■□□□ 1.72
Ubr1O70481 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ubr1O70481 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ubr1O70481 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC25.8■■□□□ 1.72
Ubr1O70481 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
Ubr1O70481 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ubr1O70481 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC25.8■■□□□ 1.72
Ubr1O70481 AC122769.4-201ENSMUST00000228166 901 ntBASIC25.79■■□□□ 1.72
Ubr1O70481 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ubr1O70481 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ubr1O70481 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ubr1O70481 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ubr1O70481 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ubr1O70481 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ubr1O70481 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC25.79■■□□□ 1.72
Ubr1O70481 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Ubr1O70481 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Ubr1O70481 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC25.78■■□□□ 1.72
Ubr1O70481 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC25.78■■□□□ 1.72
Ubr1O70481 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Ubr1O70481 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
Ubr1O70481 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
Ubr1O70481 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC25.78■■□□□ 1.72
Ubr1O70481 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Ubr1O70481 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Ubr1O70481 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Ubr1O70481 Gm12527-201ENSMUST00000117967 564 ntBASIC25.77■■□□□ 1.72
Ubr1O70481 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Ubr1O70481 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
Ubr1O70481 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
Ubr1O70481 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
Ubr1O70481 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC25.76■■□□□ 1.71
Ubr1O70481 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC25.76■■□□□ 1.71
Ubr1O70481 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
Ubr1O70481 Gm7290-201ENSMUST00000104990 617 ntBASIC25.75■■□□□ 1.71
Ubr1O70481 Gm12918-201ENSMUST00000120234 636 ntBASIC25.75■■□□□ 1.71
Ubr1O70481 Gm15710-201ENSMUST00000121821 636 ntBASIC25.75■■□□□ 1.71
Ubr1O70481 Gm5075-201ENSMUST00000196916 622 ntBASIC25.75■■□□□ 1.71
Ubr1O70481 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC25.75■■□□□ 1.71
Ubr1O70481 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC25.75■■□□□ 1.71
Ubr1O70481 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC25.75■■□□□ 1.71
Ubr1O70481 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Ubr1O70481 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Ubr1O70481 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
Ubr1O70481 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
Ubr1O70481 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC25.74■■□□□ 1.71
Ubr1O70481 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
Ubr1O70481 Gm7860-201ENSMUST00000121190 879 ntBASIC25.74■■□□□ 1.71
Ubr1O70481 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Ubr1O70481 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Ubr1O70481 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Ubr1O70481 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
Ubr1O70481 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Ubr1O70481 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
Ubr1O70481 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC25.73■■□□□ 1.71
Ubr1O70481 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ubr1O70481 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ubr1O70481 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ubr1O70481 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ubr1O70481 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
Ubr1O70481 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
Ubr1O70481 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC25.72■■□□□ 1.71
Ubr1O70481 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
Ubr1O70481 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms