Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trdmt1O55055 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trdmt1O55055 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trdmt1O55055 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trdmt1O55055 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.7■■□□□ 1.06
Trdmt1O55055 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trdmt1O55055 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.7■■□□□ 1.06
Trdmt1O55055 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.7■■□□□ 1.06
Trdmt1O55055 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Trdmt1O55055 Gm13148-201ENSMUST00000118892 745 ntBASIC21.7■■□□□ 1.06
Trdmt1O55055 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
Trdmt1O55055 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.7■■□□□ 1.06
Trdmt1O55055 Nespas-201ENSMUST00000143738 1083 ntBASIC21.7■■□□□ 1.06
Trdmt1O55055 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.7■■□□□ 1.06
Trdmt1O55055 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trdmt1O55055 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.7■■□□□ 1.06
Trdmt1O55055 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.7■■□□□ 1.06
Trdmt1O55055 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.7■■□□□ 1.06
Trdmt1O55055 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Trdmt1O55055 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.69■■□□□ 1.06
Trdmt1O55055 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trdmt1O55055 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.69■■□□□ 1.06
Trdmt1O55055 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trdmt1O55055 Gm7290-201ENSMUST00000104990 617 ntBASIC21.69■■□□□ 1.06
Trdmt1O55055 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
Trdmt1O55055 Gm12918-201ENSMUST00000120234 636 ntBASIC21.69■■□□□ 1.06
Trdmt1O55055 Gm15710-201ENSMUST00000121821 636 ntBASIC21.69■■□□□ 1.06
Trdmt1O55055 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trdmt1O55055 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Trdmt1O55055 Gm5075-201ENSMUST00000196916 622 ntBASIC21.69■■□□□ 1.06
Trdmt1O55055 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.69■■□□□ 1.06
Trdmt1O55055 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.69■■□□□ 1.06
Trdmt1O55055 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trdmt1O55055 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Trdmt1O55055 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trdmt1O55055 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trdmt1O55055 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trdmt1O55055 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trdmt1O55055 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trdmt1O55055 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trdmt1O55055 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trdmt1O55055 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.68■■□□□ 1.06
Trdmt1O55055 Gm6420-201ENSMUST00000193885 723 ntBASIC21.68■■□□□ 1.06
Trdmt1O55055 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.68■■□□□ 1.06
Trdmt1O55055 Gm6365-201ENSMUST00000054711 744 ntBASIC21.68■■□□□ 1.06
Trdmt1O55055 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.68■■□□□ 1.06
Trdmt1O55055 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trdmt1O55055 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trdmt1O55055 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trdmt1O55055 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trdmt1O55055 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.67■■□□□ 1.06
Trdmt1O55055 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trdmt1O55055 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trdmt1O55055 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trdmt1O55055 Gm13534-201ENSMUST00000121169 513 ntBASIC21.67■■□□□ 1.06
Trdmt1O55055 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.67■■□□□ 1.06
Trdmt1O55055 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trdmt1O55055 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trdmt1O55055 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.66■■□□□ 1.06
Trdmt1O55055 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.66■■□□□ 1.06
Trdmt1O55055 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trdmt1O55055 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Trdmt1O55055 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trdmt1O55055 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Trdmt1O55055 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trdmt1O55055 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trdmt1O55055 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trdmt1O55055 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trdmt1O55055 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Trdmt1O55055 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trdmt1O55055 Gm10655-201ENSMUST00000098658 1397 ntBASIC21.65■■□□□ 1.06
Trdmt1O55055 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trdmt1O55055 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.65■■□□□ 1.06
Trdmt1O55055 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trdmt1O55055 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trdmt1O55055 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trdmt1O55055 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Trdmt1O55055 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.64■■□□□ 1.06
Trdmt1O55055 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trdmt1O55055 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trdmt1O55055 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trdmt1O55055 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.64■■□□□ 1.05
Trdmt1O55055 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Trdmt1O55055 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trdmt1O55055 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.64■■□□□ 1.05
Trdmt1O55055 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Trdmt1O55055 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trdmt1O55055 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trdmt1O55055 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trdmt1O55055 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trdmt1O55055 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trdmt1O55055 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trdmt1O55055 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Trdmt1O55055 Gm12527-201ENSMUST00000117967 564 ntBASIC21.63■■□□□ 1.05
Trdmt1O55055 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.63■■□□□ 1.05
Trdmt1O55055 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.63■■□□□ 1.05
Trdmt1O55055 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trdmt1O55055 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trdmt1O55055 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.62■■□□□ 1.05
Trdmt1O55055 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms