Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Gm13534-201ENSMUST00000121169 513 ntBASIC18.94■□□□□ 0.62
Cacna1bO55017 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Cacna1bO55017 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.93■□□□□ 0.62
Cacna1bO55017 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Cacna1bO55017 Mir6236-201ENSMUST00000184437 123 ntBASIC18.93■□□□□ 0.62
Cacna1bO55017 Gm26524-201ENSMUST00000192339 390 ntBASIC18.93■□□□□ 0.62
Cacna1bO55017 Trmt13-210ENSMUST00000198454 880 ntBASIC18.93■□□□□ 0.62
Cacna1bO55017 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.93■□□□□ 0.62
Cacna1bO55017 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Cacna1bO55017 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.93■□□□□ 0.62
Cacna1bO55017 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacna1bO55017 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.92■□□□□ 0.62
Cacna1bO55017 Gm10812-201ENSMUST00000099864 546 ntBASIC18.92■□□□□ 0.62
Cacna1bO55017 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacna1bO55017 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacna1bO55017 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Cacna1bO55017 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cacna1bO55017 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacna1bO55017 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacna1bO55017 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cacna1bO55017 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cacna1bO55017 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacna1bO55017 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacna1bO55017 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacna1bO55017 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.91■□□□□ 0.62
Cacna1bO55017 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cacna1bO55017 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacna1bO55017 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cacna1bO55017 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacna1bO55017 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacna1bO55017 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Cacna1bO55017 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacna1bO55017 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacna1bO55017 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cacna1bO55017 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.9■□□□□ 0.62
Cacna1bO55017 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cacna1bO55017 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacna1bO55017 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacna1bO55017 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacna1bO55017 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cacna1bO55017 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cacna1bO55017 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cacna1bO55017 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.89■□□□□ 0.61
Cacna1bO55017 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cacna1bO55017 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Cacna1bO55017 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Cacna1bO55017 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cacna1bO55017 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cacna1bO55017 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cacna1bO55017 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cacna1bO55017 Gm6420-201ENSMUST00000193885 723 ntBASIC18.89■□□□□ 0.61
Cacna1bO55017 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.89■□□□□ 0.61
Cacna1bO55017 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cacna1bO55017 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cacna1bO55017 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cacna1bO55017 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cacna1bO55017 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.89■□□□□ 0.61
Cacna1bO55017 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1bO55017 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1bO55017 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1bO55017 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1bO55017 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1bO55017 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1bO55017 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.88■□□□□ 0.61
Cacna1bO55017 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1bO55017 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1bO55017 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1bO55017 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.88■□□□□ 0.61
Cacna1bO55017 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1bO55017 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1bO55017 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.88■□□□□ 0.61
Cacna1bO55017 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1bO55017 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.88■□□□□ 0.61
Cacna1bO55017 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.88■□□□□ 0.61
Cacna1bO55017 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.88■□□□□ 0.61
Cacna1bO55017 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1bO55017 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.87■□□□□ 0.61
Cacna1bO55017 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.87■□□□□ 0.61
Cacna1bO55017 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.87■□□□□ 0.61
Cacna1bO55017 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Cacna1bO55017 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cacna1bO55017 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cacna1bO55017 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cacna1bO55017 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Cacna1bO55017 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cacna1bO55017 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cacna1bO55017 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1bO55017 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1bO55017 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1bO55017 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1bO55017 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1bO55017 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1bO55017 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Cacna1bO55017 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1bO55017 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
Cacna1bO55017 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1bO55017 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1bO55017 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.85■□□□□ 0.61
Cacna1bO55017 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cacna1bO55017 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms