Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Kcnu1O54982 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Kcnu1O54982 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Kcnu1O54982 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Kcnu1O54982 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Kcnu1O54982 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Kcnu1O54982 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Kcnu1O54982 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Kcnu1O54982 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.83■□□□□ 0.93
Kcnu1O54982 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Kcnu1O54982 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Kcnu1O54982 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Kcnu1O54982 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Kcnu1O54982 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Kcnu1O54982 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Kcnu1O54982 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Kcnu1O54982 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Kcnu1O54982 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Kcnu1O54982 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Kcnu1O54982 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.81■□□□□ 0.92
Kcnu1O54982 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Kcnu1O54982 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Kcnu1O54982 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Kcnu1O54982 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Kcnu1O54982 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Kcnu1O54982 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.81■□□□□ 0.92
Kcnu1O54982 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.81■□□□□ 0.92
Kcnu1O54982 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Kcnu1O54982 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Kcnu1O54982 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Kcnu1O54982 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Kcnu1O54982 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Kcnu1O54982 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Kcnu1O54982 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.8■□□□□ 0.92
Kcnu1O54982 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Kcnu1O54982 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Kcnu1O54982 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Kcnu1O54982 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Kcnu1O54982 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.8■□□□□ 0.92
Kcnu1O54982 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.8■□□□□ 0.92
Kcnu1O54982 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Kcnu1O54982 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.8■□□□□ 0.92
Kcnu1O54982 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Kcnu1O54982 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Kcnu1O54982 Gm9847-201ENSMUST00000052528 599 ntBASIC20.8■□□□□ 0.92
Kcnu1O54982 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.8■□□□□ 0.92
Kcnu1O54982 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Kcnu1O54982 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Kcnu1O54982 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Kcnu1O54982 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Kcnu1O54982 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.79■□□□□ 0.92
Kcnu1O54982 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Kcnu1O54982 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Kcnu1O54982 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Kcnu1O54982 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Kcnu1O54982 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Kcnu1O54982 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Kcnu1O54982 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Kcnu1O54982 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.79■□□□□ 0.92
Kcnu1O54982 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Kcnu1O54982 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Kcnu1O54982 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Kcnu1O54982 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Kcnu1O54982 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Kcnu1O54982 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Kcnu1O54982 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Kcnu1O54982 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Kcnu1O54982 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Kcnu1O54982 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Kcnu1O54982 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Kcnu1O54982 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Kcnu1O54982 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Kcnu1O54982 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Kcnu1O54982 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Kcnu1O54982 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Kcnu1O54982 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Kcnu1O54982 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Kcnu1O54982 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Kcnu1O54982 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.76■□□□□ 0.91
Kcnu1O54982 Gm21956-201ENSMUST00000179946 522 ntBASIC20.76■□□□□ 0.91
Kcnu1O54982 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Kcnu1O54982 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Kcnu1O54982 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Kcnu1O54982 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Kcnu1O54982 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Kcnu1O54982 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Kcnu1O54982 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Kcnu1O54982 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
Kcnu1O54982 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Kcnu1O54982 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.75■□□□□ 0.91
Kcnu1O54982 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Kcnu1O54982 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Kcnu1O54982 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Kcnu1O54982 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Kcnu1O54982 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Kcnu1O54982 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Kcnu1O54982 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.75■□□□□ 0.91
Kcnu1O54982 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.74■□□□□ 0.91
Kcnu1O54982 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Kcnu1O54982 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms