Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC23.21■■□□□ 1.31
Smarce1O54941 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC23.21■■□□□ 1.31
Smarce1O54941 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smarce1O54941 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smarce1O54941 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smarce1O54941 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smarce1O54941 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smarce1O54941 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smarce1O54941 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
Smarce1O54941 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Smarce1O54941 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Smarce1O54941 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Smarce1O54941 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC23.2■■□□□ 1.3
Smarce1O54941 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Smarce1O54941 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Smarce1O54941 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Smarce1O54941 Gm27045-201ENSMUST00000182145 1402 ntBASIC23.19■■□□□ 1.3
Smarce1O54941 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Smarce1O54941 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Smarce1O54941 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Smarce1O54941 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC23.19■■□□□ 1.3
Smarce1O54941 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC23.19■■□□□ 1.3
Smarce1O54941 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Smarce1O54941 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Smarce1O54941 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Smarce1O54941 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC23.18■■□□□ 1.3
Smarce1O54941 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Smarce1O54941 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC23.18■■□□□ 1.3
Smarce1O54941 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Smarce1O54941 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Smarce1O54941 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Smarce1O54941 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Smarce1O54941 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Smarce1O54941 AA386476-201ENSMUST00000098781 1665 ntBASIC23.17■■□□□ 1.3
Smarce1O54941 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC23.17■■□□□ 1.3
Smarce1O54941 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC23.17■■□□□ 1.3
Smarce1O54941 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC23.17■■□□□ 1.3
Smarce1O54941 Gm22238-201ENSMUST00000175222 88 ntBASIC23.17■■□□□ 1.3
Smarce1O54941 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Smarce1O54941 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Smarce1O54941 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Smarce1O54941 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Smarce1O54941 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Smarce1O54941 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Smarce1O54941 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Smarce1O54941 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC23.16■■□□□ 1.3
Smarce1O54941 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Smarce1O54941 Gm43759-201ENSMUST00000196925 1261 ntBASIC23.16■■□□□ 1.3
Smarce1O54941 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.16■■□□□ 1.3
Smarce1O54941 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC23.16■■□□□ 1.3
Smarce1O54941 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Smarce1O54941 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC23.16■■□□□ 1.3
Smarce1O54941 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
Smarce1O54941 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Smarce1O54941 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Smarce1O54941 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC23.15■■□□□ 1.3
Smarce1O54941 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC23.15■■□□□ 1.3
Smarce1O54941 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Smarce1O54941 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Smarce1O54941 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Smarce1O54941 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
Smarce1O54941 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Smarce1O54941 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Smarce1O54941 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC23.14■■□□□ 1.29
Smarce1O54941 Gm6085-201ENSMUST00000182774 1470 ntBASIC23.14■■□□□ 1.29
Smarce1O54941 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC23.14■■□□□ 1.29
Smarce1O54941 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Smarce1O54941 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Smarce1O54941 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
Smarce1O54941 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC23.14■■□□□ 1.29
Smarce1O54941 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Smarce1O54941 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Smarce1O54941 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Smarce1O54941 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Smarce1O54941 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Smarce1O54941 Gm8770-201ENSMUST00000121113 1109 ntBASIC23.13■■□□□ 1.29
Smarce1O54941 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Smarce1O54941 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC23.13■■□□□ 1.29
Smarce1O54941 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Smarce1O54941 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Smarce1O54941 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Smarce1O54941 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Smarce1O54941 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Smarce1O54941 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Smarce1O54941 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smarce1O54941 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Smarce1O54941 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smarce1O54941 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smarce1O54941 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Smarce1O54941 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Smarce1O54941 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC23.11■■□□□ 1.29
Smarce1O54941 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC23.11■■□□□ 1.29
Smarce1O54941 Gm9959-201ENSMUST00000068277 390 ntBASIC23.11■■□□□ 1.29
Smarce1O54941 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Smarce1O54941 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Smarce1O54941 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC23.11■■□□□ 1.29
Smarce1O54941 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smarce1O54941 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smarce1O54941 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC23.1■■□□□ 1.29
Smarce1O54941 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms