Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Matn3O35701 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Matn3O35701 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Matn3O35701 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Matn3O35701 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Matn3O35701 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Matn3O35701 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.72■□□□□ 0.43
Matn3O35701 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Matn3O35701 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Matn3O35701 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Matn3O35701 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Matn3O35701 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Matn3O35701 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Matn3O35701 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Matn3O35701 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Matn3O35701 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.71■□□□□ 0.43
Matn3O35701 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Matn3O35701 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Matn3O35701 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Matn3O35701 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Matn3O35701 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Matn3O35701 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
Matn3O35701 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Matn3O35701 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Matn3O35701 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Matn3O35701 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.7■□□□□ 0.42
Matn3O35701 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Matn3O35701 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Matn3O35701 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Matn3O35701 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.7■□□□□ 0.42
Matn3O35701 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Matn3O35701 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Matn3O35701 Gm5812-201ENSMUST00000061073 957 ntBASIC17.7■□□□□ 0.42
Matn3O35701 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Matn3O35701 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Matn3O35701 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Matn3O35701 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Matn3O35701 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Matn3O35701 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Matn3O35701 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Matn3O35701 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Matn3O35701 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Matn3O35701 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Matn3O35701 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Matn3O35701 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.69■□□□□ 0.42
Matn3O35701 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Matn3O35701 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
Matn3O35701 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Matn3O35701 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Matn3O35701 BC021767-201ENSMUST00000126387 1716 ntBASIC17.69■□□□□ 0.42
Matn3O35701 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Matn3O35701 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Matn3O35701 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.69■□□□□ 0.42
Matn3O35701 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Matn3O35701 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Matn3O35701 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Matn3O35701 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Matn3O35701 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Matn3O35701 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Matn3O35701 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Matn3O35701 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Matn3O35701 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.68■□□□□ 0.42
Matn3O35701 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.68■□□□□ 0.42
Matn3O35701 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Matn3O35701 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.68■□□□□ 0.42
Matn3O35701 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Matn3O35701 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Matn3O35701 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Matn3O35701 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Matn3O35701 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Matn3O35701 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Matn3O35701 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Matn3O35701 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Matn3O35701 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Matn3O35701 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.67■□□□□ 0.42
Matn3O35701 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Matn3O35701 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Matn3O35701 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Matn3O35701 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Matn3O35701 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Matn3O35701 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Matn3O35701 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Matn3O35701 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Matn3O35701 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Matn3O35701 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.66■□□□□ 0.42
Matn3O35701 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.66■□□□□ 0.42
Matn3O35701 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Matn3O35701 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Matn3O35701 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.66■□□□□ 0.42
Matn3O35701 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.65■□□□□ 0.42
Matn3O35701 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Matn3O35701 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Matn3O35701 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Matn3O35701 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Matn3O35701 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Matn3O35701 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Matn3O35701 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.65■□□□□ 0.42
Matn3O35701 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Matn3O35701 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Matn3O35701 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms