Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.02■□□□□ 0.96
Nr1i3O35627 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Nr1i3O35627 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.02■□□□□ 0.96
Nr1i3O35627 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.02■□□□□ 0.96
Nr1i3O35627 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Nr1i3O35627 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nr1i3O35627 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Nr1i3O35627 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Nr1i3O35627 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.02■□□□□ 0.95
Nr1i3O35627 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nr1i3O35627 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.01■□□□□ 0.95
Nr1i3O35627 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nr1i3O35627 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.01■□□□□ 0.95
Nr1i3O35627 Golgb1-201ENSMUST00000023534 498 ntBASIC21.01■□□□□ 0.95
Nr1i3O35627 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nr1i3O35627 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Nr1i3O35627 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nr1i3O35627 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nr1i3O35627 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nr1i3O35627 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
Nr1i3O35627 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Nr1i3O35627 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Nr1i3O35627 Gm45640-201ENSMUST00000210665 1896 ntBASIC21■□□□□ 0.95
Nr1i3O35627 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21■□□□□ 0.95
Nr1i3O35627 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nr1i3O35627 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nr1i3O35627 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
Nr1i3O35627 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Nr1i3O35627 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nr1i3O35627 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.99■□□□□ 0.95
Nr1i3O35627 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.99■□□□□ 0.95
Nr1i3O35627 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nr1i3O35627 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Nr1i3O35627 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nr1i3O35627 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nr1i3O35627 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Nr1i3O35627 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nr1i3O35627 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.99■□□□□ 0.95
Nr1i3O35627 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nr1i3O35627 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nr1i3O35627 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nr1i3O35627 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nr1i3O35627 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nr1i3O35627 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Nr1i3O35627 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nr1i3O35627 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nr1i3O35627 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nr1i3O35627 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.97■□□□□ 0.95
Nr1i3O35627 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nr1i3O35627 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nr1i3O35627 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nr1i3O35627 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.97■□□□□ 0.95
Nr1i3O35627 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nr1i3O35627 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nr1i3O35627 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Nr1i3O35627 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nr1i3O35627 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nr1i3O35627 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nr1i3O35627 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nr1i3O35627 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nr1i3O35627 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Nr1i3O35627 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.96■□□□□ 0.95
Nr1i3O35627 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nr1i3O35627 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nr1i3O35627 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Nr1i3O35627 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nr1i3O35627 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Nr1i3O35627 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nr1i3O35627 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nr1i3O35627 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.96■□□□□ 0.95
Nr1i3O35627 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nr1i3O35627 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nr1i3O35627 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.96■□□□□ 0.95
Nr1i3O35627 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nr1i3O35627 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Nr1i3O35627 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nr1i3O35627 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nr1i3O35627 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nr1i3O35627 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nr1i3O35627 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nr1i3O35627 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nr1i3O35627 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.95■□□□□ 0.94
Nr1i3O35627 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.95■□□□□ 0.94
Nr1i3O35627 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.95■□□□□ 0.94
Nr1i3O35627 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Nr1i3O35627 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nr1i3O35627 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nr1i3O35627 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nr1i3O35627 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Nr1i3O35627 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nr1i3O35627 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nr1i3O35627 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nr1i3O35627 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nr1i3O35627 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nr1i3O35627 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nr1i3O35627 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nr1i3O35627 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Nr1i3O35627 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Nr1i3O35627 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nr1i3O35627 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms