Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ptch2O35595 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ptch2O35595 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.07■□□□□ 0.8
Ptch2O35595 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Ptch2O35595 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ptch2O35595 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ptch2O35595 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ptch2O35595 Gm27011-201ENSMUST00000182352 972 ntBASIC20.07■□□□□ 0.8
Ptch2O35595 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
Ptch2O35595 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ptch2O35595 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptch2O35595 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptch2O35595 Gm27801-201ENSMUST00000184174 223 ntBASIC20.06■□□□□ 0.8
Ptch2O35595 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.06■□□□□ 0.8
Ptch2O35595 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptch2O35595 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ptch2O35595 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptch2O35595 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptch2O35595 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptch2O35595 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Ptch2O35595 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptch2O35595 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptch2O35595 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptch2O35595 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.05■□□□□ 0.8
Ptch2O35595 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Ptch2O35595 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.05■□□□□ 0.8
Ptch2O35595 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ptch2O35595 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ptch2O35595 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.05■□□□□ 0.8
Ptch2O35595 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.05■□□□□ 0.8
Ptch2O35595 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ptch2O35595 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptch2O35595 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptch2O35595 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptch2O35595 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptch2O35595 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptch2O35595 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.04■□□□□ 0.8
Ptch2O35595 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.04■□□□□ 0.8
Ptch2O35595 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.04■□□□□ 0.8
Ptch2O35595 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptch2O35595 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptch2O35595 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptch2O35595 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptch2O35595 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Ptch2O35595 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ptch2O35595 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptch2O35595 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptch2O35595 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptch2O35595 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ptch2O35595 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptch2O35595 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptch2O35595 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptch2O35595 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptch2O35595 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Ptch2O35595 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.02■□□□□ 0.8
Ptch2O35595 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Ptch2O35595 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ptch2O35595 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ptch2O35595 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ptch2O35595 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.02■□□□□ 0.8
Ptch2O35595 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ptch2O35595 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Ptch2O35595 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Ptch2O35595 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Ptch2O35595 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Ptch2O35595 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ptch2O35595 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.01■□□□□ 0.79
Ptch2O35595 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.01■□□□□ 0.79
Ptch2O35595 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ptch2O35595 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ptch2O35595 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ptch2O35595 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Ptch2O35595 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.01■□□□□ 0.79
Ptch2O35595 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ptch2O35595 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ptch2O35595 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ptch2O35595 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ptch2O35595 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20■□□□□ 0.79
Ptch2O35595 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ptch2O35595 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ptch2O35595 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ptch2O35595 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ptch2O35595 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ptch2O35595 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Ptch2O35595 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ptch2O35595 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ptch2O35595 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ptch2O35595 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.98■□□□□ 0.79
Ptch2O35595 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.98■□□□□ 0.79
Ptch2O35595 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ptch2O35595 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ptch2O35595 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ptch2O35595 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.97■□□□□ 0.79
Ptch2O35595 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ptch2O35595 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.97■□□□□ 0.79
Ptch2O35595 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Ptch2O35595 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ptch2O35595 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Ptch2O35595 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ptch2O35595 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms