Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clcn6O35454 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.47■□□□□ 0.87
Clcn6O35454 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clcn6O35454 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clcn6O35454 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clcn6O35454 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.47■□□□□ 0.87
Clcn6O35454 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.47■□□□□ 0.87
Clcn6O35454 Gm28196-201ENSMUST00000187719 640 ntBASIC20.47■□□□□ 0.87
Clcn6O35454 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clcn6O35454 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clcn6O35454 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clcn6O35454 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clcn6O35454 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clcn6O35454 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clcn6O35454 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Clcn6O35454 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Clcn6O35454 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clcn6O35454 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clcn6O35454 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clcn6O35454 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clcn6O35454 Gm28745-201ENSMUST00000190069 305 ntBASIC20.45■□□□□ 0.86
Clcn6O35454 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.45■□□□□ 0.86
Clcn6O35454 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clcn6O35454 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Clcn6O35454 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.44■□□□□ 0.86
Clcn6O35454 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn6O35454 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Clcn6O35454 Gm7417-201ENSMUST00000192950 473 ntBASIC20.44■□□□□ 0.86
Clcn6O35454 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn6O35454 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.44■□□□□ 0.86
Clcn6O35454 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC20.44■□□□□ 0.86
Clcn6O35454 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn6O35454 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.44■□□□□ 0.86
Clcn6O35454 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn6O35454 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn6O35454 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn6O35454 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn6O35454 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn6O35454 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.43■□□□□ 0.86
Clcn6O35454 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn6O35454 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Clcn6O35454 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn6O35454 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn6O35454 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn6O35454 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn6O35454 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.43■□□□□ 0.86
Clcn6O35454 CT009764.1-201ENSMUST00000222260 483 ntBASIC20.43■□□□□ 0.86
Clcn6O35454 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn6O35454 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn6O35454 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Clcn6O35454 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn6O35454 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Clcn6O35454 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC20.42■□□□□ 0.86
Clcn6O35454 Gm44953-201ENSMUST00000208745 1286 ntBASIC20.42■□□□□ 0.86
Clcn6O35454 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clcn6O35454 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clcn6O35454 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clcn6O35454 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.42■□□□□ 0.86
Clcn6O35454 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clcn6O35454 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.41■□□□□ 0.86
Clcn6O35454 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Clcn6O35454 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clcn6O35454 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clcn6O35454 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Clcn6O35454 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.41■□□□□ 0.86
Clcn6O35454 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clcn6O35454 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clcn6O35454 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clcn6O35454 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Clcn6O35454 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clcn6O35454 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Clcn6O35454 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Clcn6O35454 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Clcn6O35454 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Clcn6O35454 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clcn6O35454 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clcn6O35454 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Clcn6O35454 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Clcn6O35454 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Clcn6O35454 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Clcn6O35454 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Clcn6O35454 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Clcn6O35454 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.39■□□□□ 0.85
Clcn6O35454 Gm13323-201ENSMUST00000120245 1151 ntBASIC20.39■□□□□ 0.85
Clcn6O35454 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.39■□□□□ 0.85
Clcn6O35454 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.39■□□□□ 0.85
Clcn6O35454 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Clcn6O35454 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Clcn6O35454 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
Clcn6O35454 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
Clcn6O35454 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clcn6O35454 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clcn6O35454 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clcn6O35454 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clcn6O35454 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Clcn6O35454 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clcn6O35454 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clcn6O35454 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Clcn6O35454 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clcn6O35454 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms