Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.82■□□□□ 0.92
Cpsf2O35218 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
Cpsf2O35218 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Cpsf2O35218 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cpsf2O35218 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cpsf2O35218 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cpsf2O35218 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Cpsf2O35218 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.82■□□□□ 0.92
Cpsf2O35218 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Cpsf2O35218 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Cpsf2O35218 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cpsf2O35218 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.81■□□□□ 0.92
Cpsf2O35218 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.81■□□□□ 0.92
Cpsf2O35218 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cpsf2O35218 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cpsf2O35218 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cpsf2O35218 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cpsf2O35218 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cpsf2O35218 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cpsf2O35218 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Cpsf2O35218 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cpsf2O35218 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.8■□□□□ 0.92
Cpsf2O35218 Gm14117-201ENSMUST00000122417 843 ntBASIC20.8■□□□□ 0.92
Cpsf2O35218 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cpsf2O35218 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
Cpsf2O35218 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Cpsf2O35218 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.8■□□□□ 0.92
Cpsf2O35218 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
Cpsf2O35218 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
Cpsf2O35218 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpsf2O35218 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cpsf2O35218 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
Cpsf2O35218 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpsf2O35218 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.79■□□□□ 0.92
Cpsf2O35218 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.79■□□□□ 0.92
Cpsf2O35218 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
Cpsf2O35218 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpsf2O35218 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpsf2O35218 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Cpsf2O35218 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf2O35218 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf2O35218 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.78■□□□□ 0.92
Cpsf2O35218 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.78■□□□□ 0.92
Cpsf2O35218 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Cpsf2O35218 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpsf2O35218 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Cpsf2O35218 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.78■□□□□ 0.92
Cpsf2O35218 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Cpsf2O35218 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cpsf2O35218 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Cpsf2O35218 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cpsf2O35218 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.77■□□□□ 0.92
Cpsf2O35218 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cpsf2O35218 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Cpsf2O35218 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cpsf2O35218 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpsf2O35218 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Cpsf2O35218 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf2O35218 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf2O35218 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf2O35218 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf2O35218 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.75■□□□□ 0.91
Cpsf2O35218 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Cpsf2O35218 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Cpsf2O35218 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf2O35218 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf2O35218 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf2O35218 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Cpsf2O35218 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf2O35218 Gm45102-201ENSMUST00000207427 857 ntBASIC20.74■□□□□ 0.91
Cpsf2O35218 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf2O35218 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf2O35218 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf2O35218 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf2O35218 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf2O35218 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf2O35218 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf2O35218 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf2O35218 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf2O35218 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf2O35218 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf2O35218 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf2O35218 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf2O35218 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf2O35218 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf2O35218 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf2O35218 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf2O35218 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf2O35218 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf2O35218 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf2O35218 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf2O35218 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf2O35218 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.72■□□□□ 0.91
Cpsf2O35218 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf2O35218 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.72■□□□□ 0.91
Cpsf2O35218 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf2O35218 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf2O35218 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf2O35218 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf2O35218 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms