Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Gfra3O35118 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gfra3O35118 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gfra3O35118 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Gfra3O35118 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Gfra3O35118 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gfra3O35118 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gfra3O35118 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Gfra3O35118 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Gfra3O35118 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gfra3O35118 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Gfra3O35118 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gfra3O35118 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gfra3O35118 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.87■□□□□ 0.29
Gfra3O35118 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Gfra3O35118 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gfra3O35118 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gfra3O35118 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gfra3O35118 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.87■□□□□ 0.29
Gfra3O35118 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Gfra3O35118 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Gfra3O35118 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.87■□□□□ 0.29
Gfra3O35118 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gfra3O35118 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gfra3O35118 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gfra3O35118 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gfra3O35118 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gfra3O35118 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Gfra3O35118 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gfra3O35118 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.87■□□□□ 0.29
Gfra3O35118 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gfra3O35118 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gfra3O35118 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.86■□□□□ 0.29
Gfra3O35118 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gfra3O35118 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gfra3O35118 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gfra3O35118 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gfra3O35118 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Gfra3O35118 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Gfra3O35118 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gfra3O35118 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gfra3O35118 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gfra3O35118 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.86■□□□□ 0.29
Gfra3O35118 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gfra3O35118 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gfra3O35118 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gfra3O35118 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.86■□□□□ 0.29
Gfra3O35118 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gfra3O35118 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gfra3O35118 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gfra3O35118 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Gfra3O35118 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Gfra3O35118 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gfra3O35118 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.85■□□□□ 0.29
Gfra3O35118 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Gfra3O35118 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.85■□□□□ 0.29
Gfra3O35118 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gfra3O35118 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gfra3O35118 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gfra3O35118 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.85■□□□□ 0.29
Gfra3O35118 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gfra3O35118 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.84■□□□□ 0.29
Gfra3O35118 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gfra3O35118 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.84■□□□□ 0.29
Gfra3O35118 Gm44487-201ENSMUST00000205145 325 ntBASIC16.84■□□□□ 0.29
Gfra3O35118 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gfra3O35118 Gm10493-201ENSMUST00000097270 612 ntBASIC16.84■□□□□ 0.29
Gfra3O35118 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gfra3O35118 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gfra3O35118 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.84■□□□□ 0.29
Gfra3O35118 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.84■□□□□ 0.29
Gfra3O35118 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gfra3O35118 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gfra3O35118 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.83■□□□□ 0.28
Gfra3O35118 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.83■□□□□ 0.28
Gfra3O35118 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gfra3O35118 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gfra3O35118 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.83■□□□□ 0.28
Gfra3O35118 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Gfra3O35118 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Gfra3O35118 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gfra3O35118 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Gfra3O35118 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gfra3O35118 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gfra3O35118 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.83■□□□□ 0.28
Gfra3O35118 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gfra3O35118 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gfra3O35118 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.82■□□□□ 0.28
Gfra3O35118 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gfra3O35118 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.82■□□□□ 0.28
Gfra3O35118 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gfra3O35118 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
Gfra3O35118 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.82■□□□□ 0.28
Gfra3O35118 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.82■□□□□ 0.28
Gfra3O35118 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.82■□□□□ 0.28
Gfra3O35118 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gfra3O35118 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.82■□□□□ 0.28
Gfra3O35118 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Gfra3O35118 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gfra3O35118 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms