Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pkd1O08852 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.63□□□□□ -0.39
Pkd1O08852 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pkd1O08852 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pkd1O08852 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pkd1O08852 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pkd1O08852 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pkd1O08852 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.62□□□□□ -0.39
Pkd1O08852 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pkd1O08852 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pkd1O08852 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Pkd1O08852 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC12.62□□□□□ -0.39
Pkd1O08852 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pkd1O08852 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pkd1O08852 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pkd1O08852 AC153881.1-201ENSMUST00000214448 284 ntBASIC12.62□□□□□ -0.39
Pkd1O08852 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pkd1O08852 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pkd1O08852 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC12.61□□□□□ -0.39
Pkd1O08852 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pkd1O08852 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pkd1O08852 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pkd1O08852 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC12.61□□□□□ -0.39
Pkd1O08852 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pkd1O08852 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC12.61□□□□□ -0.39
Pkd1O08852 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC12.61□□□□□ -0.39
Pkd1O08852 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.61□□□□□ -0.39
Pkd1O08852 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pkd1O08852 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pkd1O08852 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Pkd1O08852 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pkd1O08852 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pkd1O08852 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pkd1O08852 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pkd1O08852 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pkd1O08852 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pkd1O08852 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pkd1O08852 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Pkd1O08852 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pkd1O08852 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pkd1O08852 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pkd1O08852 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pkd1O08852 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pkd1O08852 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.6□□□□□ -0.39
Pkd1O08852 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Pkd1O08852 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pkd1O08852 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pkd1O08852 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC12.6□□□□□ -0.39
Pkd1O08852 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pkd1O08852 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pkd1O08852 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pkd1O08852 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pkd1O08852 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pkd1O08852 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Pkd1O08852 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pkd1O08852 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pkd1O08852 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pkd1O08852 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pkd1O08852 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pkd1O08852 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pkd1O08852 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pkd1O08852 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pkd1O08852 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pkd1O08852 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pkd1O08852 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pkd1O08852 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pkd1O08852 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pkd1O08852 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.59□□□□□ -0.39
Pkd1O08852 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pkd1O08852 Gm11643-201ENSMUST00000119578 864 ntBASIC12.58□□□□□ -0.4
Pkd1O08852 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.58□□□□□ -0.4
Pkd1O08852 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pkd1O08852 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pkd1O08852 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pkd1O08852 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pkd1O08852 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pkd1O08852 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pkd1O08852 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pkd1O08852 Gm37415-201ENSMUST00000192265 2054 ntBASIC12.58□□□□□ -0.4
Pkd1O08852 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pkd1O08852 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.58□□□□□ -0.4
Pkd1O08852 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Pkd1O08852 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
Pkd1O08852 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pkd1O08852 Rab3c-203ENSMUST00000224180 967 ntBASIC12.57□□□□□ -0.4
Pkd1O08852 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pkd1O08852 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pkd1O08852 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pkd1O08852 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Pkd1O08852 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pkd1O08852 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pkd1O08852 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pkd1O08852 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pkd1O08852 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pkd1O08852 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Pkd1O08852 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pkd1O08852 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Pkd1O08852 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pkd1O08852 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pkd1O08852 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms