Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Raet1aO08602 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Raet1aO08602 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Raet1aO08602 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Raet1aO08602 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raet1aO08602 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raet1aO08602 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raet1aO08602 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raet1aO08602 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raet1aO08602 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Raet1aO08602 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raet1aO08602 Golph3-202ENSMUST00000226517 2359 ntBASIC17.31■□□□□ 0.36
Raet1aO08602 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raet1aO08602 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raet1aO08602 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raet1aO08602 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.31■□□□□ 0.36
Raet1aO08602 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raet1aO08602 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Raet1aO08602 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Raet1aO08602 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raet1aO08602 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Raet1aO08602 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raet1aO08602 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Raet1aO08602 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.3■□□□□ 0.36
Raet1aO08602 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.3■□□□□ 0.36
Raet1aO08602 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raet1aO08602 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Raet1aO08602 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raet1aO08602 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1aO08602 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1aO08602 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1aO08602 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1aO08602 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1aO08602 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1aO08602 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1aO08602 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
Raet1aO08602 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1aO08602 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Raet1aO08602 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1aO08602 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Raet1aO08602 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1aO08602 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1aO08602 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1aO08602 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1aO08602 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raet1aO08602 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raet1aO08602 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raet1aO08602 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Raet1aO08602 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Raet1aO08602 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raet1aO08602 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.28■□□□□ 0.36
Raet1aO08602 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raet1aO08602 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raet1aO08602 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Raet1aO08602 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raet1aO08602 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Raet1aO08602 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Raet1aO08602 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raet1aO08602 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Raet1aO08602 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.27■□□□□ 0.36
Raet1aO08602 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Raet1aO08602 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Raet1aO08602 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.27■□□□□ 0.36
Raet1aO08602 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Raet1aO08602 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Raet1aO08602 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Raet1aO08602 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Raet1aO08602 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Raet1aO08602 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Raet1aO08602 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Raet1aO08602 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Raet1aO08602 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Raet1aO08602 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Raet1aO08602 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.26■□□□□ 0.35
Raet1aO08602 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Raet1aO08602 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.26■□□□□ 0.35
Raet1aO08602 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Raet1aO08602 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Raet1aO08602 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.26■□□□□ 0.35
Raet1aO08602 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.26■□□□□ 0.35
Raet1aO08602 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.26■□□□□ 0.35
Raet1aO08602 Spcs1-204ENSMUST00000226782 949 ntBASIC17.26■□□□□ 0.35
Raet1aO08602 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Raet1aO08602 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Raet1aO08602 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Raet1aO08602 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Raet1aO08602 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Raet1aO08602 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Raet1aO08602 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Raet1aO08602 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Raet1aO08602 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Raet1aO08602 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Raet1aO08602 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Raet1aO08602 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Raet1aO08602 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Raet1aO08602 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Raet1aO08602 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Raet1aO08602 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.25■□□□□ 0.35
Raet1aO08602 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Raet1aO08602 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms