Protein–RNA interactions for Protein: O08547

Sec22b, Vesicle-trafficking protein SEC22b, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec22bO08547 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.3■□□□□ 0.68
Sec22bO08547 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.3■□□□□ 0.68
Sec22bO08547 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sec22bO08547 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sec22bO08547 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sec22bO08547 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sec22bO08547 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.3■□□□□ 0.68
Sec22bO08547 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sec22bO08547 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sec22bO08547 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sec22bO08547 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sec22bO08547 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sec22bO08547 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sec22bO08547 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.29■□□□□ 0.68
Sec22bO08547 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sec22bO08547 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sec22bO08547 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Sec22bO08547 Iqck-206ENSMUST00000208658 2891 ntBASIC19.29■□□□□ 0.68
Sec22bO08547 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sec22bO08547 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sec22bO08547 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sec22bO08547 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sec22bO08547 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Sec22bO08547 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sec22bO08547 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.28■□□□□ 0.68
Sec22bO08547 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sec22bO08547 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sec22bO08547 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sec22bO08547 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.28■□□□□ 0.68
Sec22bO08547 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Sec22bO08547 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Sec22bO08547 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sec22bO08547 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sec22bO08547 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.27■□□□□ 0.68
Sec22bO08547 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sec22bO08547 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sec22bO08547 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Sec22bO08547 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sec22bO08547 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sec22bO08547 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sec22bO08547 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.26■□□□□ 0.67
Sec22bO08547 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sec22bO08547 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sec22bO08547 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sec22bO08547 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.26■□□□□ 0.67
Sec22bO08547 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sec22bO08547 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sec22bO08547 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sec22bO08547 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sec22bO08547 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sec22bO08547 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sec22bO08547 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.25■□□□□ 0.67
Sec22bO08547 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.25■□□□□ 0.67
Sec22bO08547 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.25■□□□□ 0.67
Sec22bO08547 Golgb1-201ENSMUST00000023534 498 ntBASIC19.25■□□□□ 0.67
Sec22bO08547 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Sec22bO08547 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sec22bO08547 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sec22bO08547 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.25■□□□□ 0.67
Sec22bO08547 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sec22bO08547 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.24■□□□□ 0.67
Sec22bO08547 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sec22bO08547 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sec22bO08547 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sec22bO08547 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sec22bO08547 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sec22bO08547 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sec22bO08547 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sec22bO08547 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sec22bO08547 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.23■□□□□ 0.67
Sec22bO08547 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Sec22bO08547 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.23■□□□□ 0.67
Sec22bO08547 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sec22bO08547 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Sec22bO08547 Gm12922-201ENSMUST00000120626 809 ntBASIC19.23■□□□□ 0.67
Sec22bO08547 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sec22bO08547 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sec22bO08547 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sec22bO08547 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.23■□□□□ 0.67
Sec22bO08547 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sec22bO08547 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Sec22bO08547 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sec22bO08547 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sec22bO08547 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sec22bO08547 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sec22bO08547 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sec22bO08547 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Sec22bO08547 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.22■□□□□ 0.67
Sec22bO08547 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sec22bO08547 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sec22bO08547 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Sec22bO08547 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sec22bO08547 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sec22bO08547 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Sec22bO08547 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sec22bO08547 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sec22bO08547 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sec22bO08547 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sec22bO08547 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.21■□□□□ 0.67
Sec22bO08547 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms