Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Spcs1-204ENSMUST00000226782 949 ntBASIC17.22■□□□□ 0.35
Trav13d-3J3QMG8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav13d-3J3QMG8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav13d-3J3QMG8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav13d-3J3QMG8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav13d-3J3QMG8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav13d-3J3QMG8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav13d-3J3QMG8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav13d-3J3QMG8 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.21■□□□□ 0.35
Trav13d-3J3QMG8 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav13d-3J3QMG8 Gm12251-201ENSMUST00000117893 792 ntBASIC17.21■□□□□ 0.35
Trav13d-3J3QMG8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.21■□□□□ 0.35
Trav13d-3J3QMG8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav13d-3J3QMG8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav13d-3J3QMG8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Trav13d-3J3QMG8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Trav13d-3J3QMG8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav13d-3J3QMG8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav13d-3J3QMG8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav13d-3J3QMG8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav13d-3J3QMG8 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.2■□□□□ 0.34
Trav13d-3J3QMG8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Trav13d-3J3QMG8 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.2■□□□□ 0.34
Trav13d-3J3QMG8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.2■□□□□ 0.34
Trav13d-3J3QMG8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trav13d-3J3QMG8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trav13d-3J3QMG8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Trav13d-3J3QMG8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav13d-3J3QMG8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav13d-3J3QMG8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13d-3J3QMG8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13d-3J3QMG8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13d-3J3QMG8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13d-3J3QMG8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13d-3J3QMG8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.19■□□□□ 0.34
Trav13d-3J3QMG8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13d-3J3QMG8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trav13d-3J3QMG8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13d-3J3QMG8 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13d-3J3QMG8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13d-3J3QMG8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13d-3J3QMG8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13d-3J3QMG8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav13d-3J3QMG8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trav13d-3J3QMG8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav13d-3J3QMG8 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.18■□□□□ 0.34
Trav13d-3J3QMG8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trav13d-3J3QMG8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav13d-3J3QMG8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav13d-3J3QMG8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav13d-3J3QMG8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.18■□□□□ 0.34
Trav13d-3J3QMG8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav13d-3J3QMG8 Gm12821-201ENSMUST00000120022 600 ntBASIC17.17■□□□□ 0.34
Trav13d-3J3QMG8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav13d-3J3QMG8 Gm27454-201ENSMUST00000185090 204 ntBASIC17.17■□□□□ 0.34
Trav13d-3J3QMG8 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.17■□□□□ 0.34
Trav13d-3J3QMG8 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.17■□□□□ 0.34
Trav13d-3J3QMG8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Trav13d-3J3QMG8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav13d-3J3QMG8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav13d-3J3QMG8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav13d-3J3QMG8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13d-3J3QMG8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13d-3J3QMG8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13d-3J3QMG8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13d-3J3QMG8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13d-3J3QMG8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13d-3J3QMG8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13d-3J3QMG8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13d-3J3QMG8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13d-3J3QMG8 Mir7075-201ENSMUST00000184187 82 ntBASIC17.16■□□□□ 0.34
Trav13d-3J3QMG8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.16■□□□□ 0.34
Trav13d-3J3QMG8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13d-3J3QMG8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13d-3J3QMG8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13d-3J3QMG8 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13d-3J3QMG8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13d-3J3QMG8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.16■□□□□ 0.34
Trav13d-3J3QMG8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trav13d-3J3QMG8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav13d-3J3QMG8 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav13d-3J3QMG8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav13d-3J3QMG8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav13d-3J3QMG8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.15■□□□□ 0.34
Trav13d-3J3QMG8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav13d-3J3QMG8 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.15■□□□□ 0.34
Trav13d-3J3QMG8 Serp2-204ENSMUST00000228055 705 ntBASIC17.15■□□□□ 0.34
Trav13d-3J3QMG8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.15■□□□□ 0.34
Trav13d-3J3QMG8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav13d-3J3QMG8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav13d-3J3QMG8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.14■□□□□ 0.34
Trav13d-3J3QMG8 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav13d-3J3QMG8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Trav13d-3J3QMG8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav13d-3J3QMG8 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.14■□□□□ 0.33
Trav13d-3J3QMG8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav13d-3J3QMG8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav13d-3J3QMG8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav13d-3J3QMG8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13d-3J3QMG8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms