Protein–RNA interactions for Protein: J3KMR8

Gm17535, Predicted gene, 17535, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17535J3KMR8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Gm17535J3KMR8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Gm17535J3KMR8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm17535J3KMR8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm17535J3KMR8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm17535J3KMR8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Gm17535J3KMR8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Gm17535J3KMR8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm17535J3KMR8 Gm10849-201ENSMUST00000100397 618 ntBASIC20.91■□□□□ 0.94
Gm17535J3KMR8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm17535J3KMR8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Gm17535J3KMR8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.91■□□□□ 0.94
Gm17535J3KMR8 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.91■□□□□ 0.94
Gm17535J3KMR8 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Gm17535J3KMR8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Gm17535J3KMR8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm17535J3KMR8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm17535J3KMR8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm17535J3KMR8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm17535J3KMR8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.9■□□□□ 0.94
Gm17535J3KMR8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gm17535J3KMR8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm17535J3KMR8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gm17535J3KMR8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gm17535J3KMR8 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Gm17535J3KMR8 Gm9988-201ENSMUST00000069786 435 ntBASIC20.9■□□□□ 0.94
Gm17535J3KMR8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Gm17535J3KMR8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
Gm17535J3KMR8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Gm17535J3KMR8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gm17535J3KMR8 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Gm17535J3KMR8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Gm17535J3KMR8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.89■□□□□ 0.93
Gm17535J3KMR8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.89■□□□□ 0.93
Gm17535J3KMR8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm17535J3KMR8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
Gm17535J3KMR8 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Gm17535J3KMR8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.89■□□□□ 0.93
Gm17535J3KMR8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm17535J3KMR8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Gm17535J3KMR8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm17535J3KMR8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm17535J3KMR8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm17535J3KMR8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm17535J3KMR8 Reep4-203ENSMUST00000226563 1444 ntBASIC20.87■□□□□ 0.93
Gm17535J3KMR8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm17535J3KMR8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.87■□□□□ 0.93
Gm17535J3KMR8 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm17535J3KMR8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.87■□□□□ 0.93
Gm17535J3KMR8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Gm17535J3KMR8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Gm17535J3KMR8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm17535J3KMR8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm17535J3KMR8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.87■□□□□ 0.93
Gm17535J3KMR8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Gm17535J3KMR8 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.87■□□□□ 0.93
Gm17535J3KMR8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm17535J3KMR8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Gm17535J3KMR8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.86■□□□□ 0.93
Gm17535J3KMR8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.86■□□□□ 0.93
Gm17535J3KMR8 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm17535J3KMR8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Gm17535J3KMR8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm17535J3KMR8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Gm17535J3KMR8 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm17535J3KMR8 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm17535J3KMR8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm17535J3KMR8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm17535J3KMR8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm17535J3KMR8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm17535J3KMR8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm17535J3KMR8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Gm17535J3KMR8 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.85■□□□□ 0.93
Gm17535J3KMR8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Gm17535J3KMR8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm17535J3KMR8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm17535J3KMR8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.84■□□□□ 0.93
Gm17535J3KMR8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm17535J3KMR8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.84■□□□□ 0.93
Gm17535J3KMR8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.84■□□□□ 0.93
Gm17535J3KMR8 Gm42778-201ENSMUST00000199644 553 ntBASIC20.84■□□□□ 0.93
Gm17535J3KMR8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm17535J3KMR8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Gm17535J3KMR8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm17535J3KMR8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm17535J3KMR8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm17535J3KMR8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Gm17535J3KMR8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gm17535J3KMR8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Gm17535J3KMR8 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.83■□□□□ 0.93
Gm17535J3KMR8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.83■□□□□ 0.93
Gm17535J3KMR8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
Gm17535J3KMR8 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gm17535J3KMR8 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.83■□□□□ 0.93
Gm17535J3KMR8 Gm42569-201ENSMUST00000200539 472 ntBASIC20.83■□□□□ 0.93
Gm17535J3KMR8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Gm17535J3KMR8 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gm17535J3KMR8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gm17535J3KMR8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gm17535J3KMR8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms