Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chrna9G3X8Z7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chrna9G3X8Z7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Chrna9G3X8Z7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chrna9G3X8Z7 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Chrna9G3X8Z7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Chrna9G3X8Z7 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chrna9G3X8Z7 Serp2-204ENSMUST00000228055 705 ntBASIC21.09■□□□□ 0.97
Chrna9G3X8Z7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chrna9G3X8Z7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
Chrna9G3X8Z7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Chrna9G3X8Z7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Chrna9G3X8Z7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chrna9G3X8Z7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chrna9G3X8Z7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chrna9G3X8Z7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.08■□□□□ 0.97
Chrna9G3X8Z7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chrna9G3X8Z7 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
Chrna9G3X8Z7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Chrna9G3X8Z7 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Chrna9G3X8Z7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Chrna9G3X8Z7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.08■□□□□ 0.97
Chrna9G3X8Z7 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.08■□□□□ 0.97
Chrna9G3X8Z7 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chrna9G3X8Z7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Chrna9G3X8Z7 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Chrna9G3X8Z7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chrna9G3X8Z7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chrna9G3X8Z7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Chrna9G3X8Z7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Chrna9G3X8Z7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chrna9G3X8Z7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.07■□□□□ 0.96
Chrna9G3X8Z7 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chrna9G3X8Z7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chrna9G3X8Z7 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chrna9G3X8Z7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chrna9G3X8Z7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chrna9G3X8Z7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Chrna9G3X8Z7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chrna9G3X8Z7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chrna9G3X8Z7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chrna9G3X8Z7 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chrna9G3X8Z7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.06■□□□□ 0.96
Chrna9G3X8Z7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chrna9G3X8Z7 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chrna9G3X8Z7 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.06■□□□□ 0.96
Chrna9G3X8Z7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chrna9G3X8Z7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chrna9G3X8Z7 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.06■□□□□ 0.96
Chrna9G3X8Z7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chrna9G3X8Z7 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Chrna9G3X8Z7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Chrna9G3X8Z7 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chrna9G3X8Z7 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chrna9G3X8Z7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Chrna9G3X8Z7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Chrna9G3X8Z7 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chrna9G3X8Z7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chrna9G3X8Z7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chrna9G3X8Z7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Chrna9G3X8Z7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.04■□□□□ 0.96
Chrna9G3X8Z7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna9G3X8Z7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna9G3X8Z7 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Chrna9G3X8Z7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.04■□□□□ 0.96
Chrna9G3X8Z7 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.04■□□□□ 0.96
Chrna9G3X8Z7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna9G3X8Z7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna9G3X8Z7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna9G3X8Z7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.04■□□□□ 0.96
Chrna9G3X8Z7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna9G3X8Z7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna9G3X8Z7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna9G3X8Z7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna9G3X8Z7 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chrna9G3X8Z7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Chrna9G3X8Z7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chrna9G3X8Z7 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Chrna9G3X8Z7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Chrna9G3X8Z7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.03■□□□□ 0.96
Chrna9G3X8Z7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chrna9G3X8Z7 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.03■□□□□ 0.96
Chrna9G3X8Z7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Chrna9G3X8Z7 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.03■□□□□ 0.96
Chrna9G3X8Z7 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chrna9G3X8Z7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chrna9G3X8Z7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chrna9G3X8Z7 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chrna9G3X8Z7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.02■□□□□ 0.96
Chrna9G3X8Z7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Chrna9G3X8Z7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chrna9G3X8Z7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chrna9G3X8Z7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chrna9G3X8Z7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chrna9G3X8Z7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.02■□□□□ 0.95
Chrna9G3X8Z7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Chrna9G3X8Z7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.01■□□□□ 0.95
Chrna9G3X8Z7 Golph3-205ENSMUST00000228671 2842 ntBASIC21.01■□□□□ 0.95
Chrna9G3X8Z7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Chrna9G3X8Z7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms