Protein–RNA interactions for Protein: F7BCN9

Gm28038, Predicted gene, 28038 (Fragment), mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28038F7BCN9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm28038F7BCN9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gm28038F7BCN9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Gm28038F7BCN9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Gm28038F7BCN9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Gm28038F7BCN9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Gm28038F7BCN9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28038F7BCN9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28038F7BCN9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28038F7BCN9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28038F7BCN9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28038F7BCN9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28038F7BCN9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28038F7BCN9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC14.45□□□□□ -0.1
Gm28038F7BCN9 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.45□□□□□ -0.1
Gm28038F7BCN9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Gm28038F7BCN9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC14.45□□□□□ -0.1
Gm28038F7BCN9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Gm28038F7BCN9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Gm28038F7BCN9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Gm28038F7BCN9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Gm28038F7BCN9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28038F7BCN9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Gm28038F7BCN9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28038F7BCN9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28038F7BCN9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Gm28038F7BCN9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28038F7BCN9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28038F7BCN9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28038F7BCN9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28038F7BCN9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Gm28038F7BCN9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28038F7BCN9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28038F7BCN9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28038F7BCN9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Gm28038F7BCN9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28038F7BCN9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28038F7BCN9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14.43□□□□□ -0.1
Gm28038F7BCN9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28038F7BCN9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28038F7BCN9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28038F7BCN9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28038F7BCN9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28038F7BCN9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
Gm28038F7BCN9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Gm28038F7BCN9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28038F7BCN9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Gm28038F7BCN9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Gm28038F7BCN9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28038F7BCN9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28038F7BCN9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28038F7BCN9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28038F7BCN9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28038F7BCN9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Gm28038F7BCN9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Gm28038F7BCN9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Gm28038F7BCN9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Gm28038F7BCN9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28038F7BCN9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28038F7BCN9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28038F7BCN9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28038F7BCN9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28038F7BCN9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28038F7BCN9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28038F7BCN9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28038F7BCN9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Gm28038F7BCN9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28038F7BCN9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28038F7BCN9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Gm28038F7BCN9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28038F7BCN9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28038F7BCN9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28038F7BCN9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28038F7BCN9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Gm28038F7BCN9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28038F7BCN9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC14.41□□□□□ -0.1
Gm28038F7BCN9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28038F7BCN9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28038F7BCN9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28038F7BCN9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.41□□□□□ -0.1
Gm28038F7BCN9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28038F7BCN9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28038F7BCN9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28038F7BCN9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28038F7BCN9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28038F7BCN9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28038F7BCN9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28038F7BCN9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28038F7BCN9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28038F7BCN9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28038F7BCN9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28038F7BCN9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC14.4□□□□□ -0.1
Gm28038F7BCN9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28038F7BCN9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28038F7BCN9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28038F7BCN9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28038F7BCN9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28038F7BCN9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.4□□□□□ -0.1
Gm28038F7BCN9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28038F7BCN9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms