Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Gm7514-201ENSMUST00000209475 934 ntBASIC21.55■■□□□ 1.04
R3hdm1E9Q9Q2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
R3hdm1E9Q9Q2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
R3hdm1E9Q9Q2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
R3hdm1E9Q9Q2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
R3hdm1E9Q9Q2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
R3hdm1E9Q9Q2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.55■■□□□ 1.04
R3hdm1E9Q9Q2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.55■■□□□ 1.04
R3hdm1E9Q9Q2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
R3hdm1E9Q9Q2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
R3hdm1E9Q9Q2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
R3hdm1E9Q9Q2 Mir5133-201ENSMUST00000174955 77 ntBASIC21.54■■□□□ 1.04
R3hdm1E9Q9Q2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.54■■□□□ 1.04
R3hdm1E9Q9Q2 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.54■■□□□ 1.04
R3hdm1E9Q9Q2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
R3hdm1E9Q9Q2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
R3hdm1E9Q9Q2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
R3hdm1E9Q9Q2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
R3hdm1E9Q9Q2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
R3hdm1E9Q9Q2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
R3hdm1E9Q9Q2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
R3hdm1E9Q9Q2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
R3hdm1E9Q9Q2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
R3hdm1E9Q9Q2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
R3hdm1E9Q9Q2 Gm20760-201ENSMUST00000179197 648 ntBASIC21.53■■□□□ 1.04
R3hdm1E9Q9Q2 Mir7071-201ENSMUST00000184847 69 ntBASIC21.53■■□□□ 1.04
R3hdm1E9Q9Q2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
R3hdm1E9Q9Q2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
R3hdm1E9Q9Q2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
R3hdm1E9Q9Q2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
R3hdm1E9Q9Q2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
R3hdm1E9Q9Q2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
R3hdm1E9Q9Q2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.52■■□□□ 1.04
R3hdm1E9Q9Q2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
R3hdm1E9Q9Q2 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.52■■□□□ 1.04
R3hdm1E9Q9Q2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.52■■□□□ 1.04
R3hdm1E9Q9Q2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
R3hdm1E9Q9Q2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
R3hdm1E9Q9Q2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
R3hdm1E9Q9Q2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
R3hdm1E9Q9Q2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
R3hdm1E9Q9Q2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
R3hdm1E9Q9Q2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
R3hdm1E9Q9Q2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
R3hdm1E9Q9Q2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
R3hdm1E9Q9Q2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
R3hdm1E9Q9Q2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
R3hdm1E9Q9Q2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
R3hdm1E9Q9Q2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
R3hdm1E9Q9Q2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
R3hdm1E9Q9Q2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
R3hdm1E9Q9Q2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
R3hdm1E9Q9Q2 Gm4968-201ENSMUST00000071458 858 ntBASIC21.51■■□□□ 1.03
R3hdm1E9Q9Q2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
R3hdm1E9Q9Q2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
R3hdm1E9Q9Q2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.5■■□□□ 1.03
R3hdm1E9Q9Q2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.5■■□□□ 1.03
R3hdm1E9Q9Q2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
R3hdm1E9Q9Q2 Iqck-206ENSMUST00000208658 2891 ntBASIC21.5■■□□□ 1.03
R3hdm1E9Q9Q2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
R3hdm1E9Q9Q2 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
R3hdm1E9Q9Q2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
R3hdm1E9Q9Q2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
R3hdm1E9Q9Q2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
R3hdm1E9Q9Q2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
R3hdm1E9Q9Q2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
R3hdm1E9Q9Q2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
R3hdm1E9Q9Q2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
R3hdm1E9Q9Q2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
R3hdm1E9Q9Q2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
R3hdm1E9Q9Q2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
R3hdm1E9Q9Q2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.49■■□□□ 1.03
R3hdm1E9Q9Q2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
R3hdm1E9Q9Q2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.49■■□□□ 1.03
R3hdm1E9Q9Q2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.49■■□□□ 1.03
R3hdm1E9Q9Q2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
R3hdm1E9Q9Q2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
R3hdm1E9Q9Q2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
R3hdm1E9Q9Q2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
R3hdm1E9Q9Q2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.48■■□□□ 1.03
R3hdm1E9Q9Q2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
R3hdm1E9Q9Q2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
R3hdm1E9Q9Q2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
R3hdm1E9Q9Q2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
R3hdm1E9Q9Q2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
R3hdm1E9Q9Q2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
R3hdm1E9Q9Q2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
R3hdm1E9Q9Q2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
R3hdm1E9Q9Q2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
R3hdm1E9Q9Q2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
R3hdm1E9Q9Q2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.47■■□□□ 1.03
R3hdm1E9Q9Q2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
R3hdm1E9Q9Q2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
R3hdm1E9Q9Q2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
R3hdm1E9Q9Q2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.47■■□□□ 1.03
R3hdm1E9Q9Q2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
R3hdm1E9Q9Q2 Gm8520-201ENSMUST00000186517 868 ntBASIC21.47■■□□□ 1.03
R3hdm1E9Q9Q2 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.47■■□□□ 1.03
R3hdm1E9Q9Q2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
R3hdm1E9Q9Q2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms