Protein–RNA interactions for Protein: E9PXX9

Slc28a1, Sodium/nucleoside cotransporter, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a1E9PXX9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc28a1E9PXX9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc28a1E9PXX9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc28a1E9PXX9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc28a1E9PXX9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Slc28a1E9PXX9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc28a1E9PXX9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc28a1E9PXX9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Slc28a1E9PXX9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc28a1E9PXX9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Slc28a1E9PXX9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.39■□□□□ 0.53
Slc28a1E9PXX9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc28a1E9PXX9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc28a1E9PXX9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slc28a1E9PXX9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Slc28a1E9PXX9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.38■□□□□ 0.53
Slc28a1E9PXX9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc28a1E9PXX9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Slc28a1E9PXX9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc28a1E9PXX9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc28a1E9PXX9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc28a1E9PXX9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc28a1E9PXX9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc28a1E9PXX9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc28a1E9PXX9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc28a1E9PXX9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Slc28a1E9PXX9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.37■□□□□ 0.53
Slc28a1E9PXX9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Slc28a1E9PXX9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc28a1E9PXX9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Slc28a1E9PXX9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc28a1E9PXX9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc28a1E9PXX9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Slc28a1E9PXX9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Slc28a1E9PXX9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc28a1E9PXX9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc28a1E9PXX9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Slc28a1E9PXX9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc28a1E9PXX9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc28a1E9PXX9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc28a1E9PXX9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc28a1E9PXX9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc28a1E9PXX9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Slc28a1E9PXX9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc28a1E9PXX9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc28a1E9PXX9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Slc28a1E9PXX9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc28a1E9PXX9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc28a1E9PXX9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Slc28a1E9PXX9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc28a1E9PXX9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc28a1E9PXX9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc28a1E9PXX9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc28a1E9PXX9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc28a1E9PXX9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.35■□□□□ 0.53
Slc28a1E9PXX9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc28a1E9PXX9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc28a1E9PXX9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc28a1E9PXX9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.35■□□□□ 0.53
Slc28a1E9PXX9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.35■□□□□ 0.53
Slc28a1E9PXX9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc28a1E9PXX9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc28a1E9PXX9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc28a1E9PXX9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc28a1E9PXX9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc28a1E9PXX9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc28a1E9PXX9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc28a1E9PXX9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc28a1E9PXX9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Slc28a1E9PXX9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc28a1E9PXX9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc28a1E9PXX9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.34■□□□□ 0.53
Slc28a1E9PXX9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc28a1E9PXX9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Slc28a1E9PXX9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slc28a1E9PXX9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc28a1E9PXX9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc28a1E9PXX9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Slc28a1E9PXX9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Slc28a1E9PXX9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc28a1E9PXX9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc28a1E9PXX9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Slc28a1E9PXX9 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.33■□□□□ 0.53
Slc28a1E9PXX9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Slc28a1E9PXX9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Slc28a1E9PXX9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc28a1E9PXX9 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc28a1E9PXX9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc28a1E9PXX9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.33■□□□□ 0.52
Slc28a1E9PXX9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc28a1E9PXX9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Slc28a1E9PXX9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc28a1E9PXX9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc28a1E9PXX9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc28a1E9PXX9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc28a1E9PXX9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc28a1E9PXX9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc28a1E9PXX9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc28a1E9PXX9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc28a1E9PXX9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms