Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Pcdh17E9PXF0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh17E9PXF0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh17E9PXF0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh17E9PXF0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh17E9PXF0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.5
Pcdh17E9PXF0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.5
Pcdh17E9PXF0 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.14■□□□□ 0.49
Pcdh17E9PXF0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdh17E9PXF0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdh17E9PXF0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh17E9PXF0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Pcdh17E9PXF0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh17E9PXF0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh17E9PXF0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh17E9PXF0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh17E9PXF0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh17E9PXF0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh17E9PXF0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh17E9PXF0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcdh17E9PXF0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.13■□□□□ 0.49
Pcdh17E9PXF0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pcdh17E9PXF0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh17E9PXF0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh17E9PXF0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh17E9PXF0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh17E9PXF0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh17E9PXF0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh17E9PXF0 Gm37179-201ENSMUST00000194862 823 ntBASIC18.12■□□□□ 0.49
Pcdh17E9PXF0 Gm42778-201ENSMUST00000199644 553 ntBASIC18.12■□□□□ 0.49
Pcdh17E9PXF0 AV356131-201ENSMUST00000206201 750 ntBASIC18.12■□□□□ 0.49
Pcdh17E9PXF0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh17E9PXF0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh17E9PXF0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh17E9PXF0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.12■□□□□ 0.49
Pcdh17E9PXF0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh17E9PXF0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh17E9PXF0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh17E9PXF0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh17E9PXF0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh17E9PXF0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh17E9PXF0 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Pcdh17E9PXF0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Pcdh17E9PXF0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh17E9PXF0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh17E9PXF0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh17E9PXF0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdh17E9PXF0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pcdh17E9PXF0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh17E9PXF0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pcdh17E9PXF0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh17E9PXF0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh17E9PXF0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.1■□□□□ 0.49
Pcdh17E9PXF0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh17E9PXF0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh17E9PXF0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh17E9PXF0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh17E9PXF0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh17E9PXF0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh17E9PXF0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh17E9PXF0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh17E9PXF0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh17E9PXF0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh17E9PXF0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh17E9PXF0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh17E9PXF0 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.09■□□□□ 0.49
Pcdh17E9PXF0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Pcdh17E9PXF0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh17E9PXF0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Pcdh17E9PXF0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh17E9PXF0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh17E9PXF0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh17E9PXF0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh17E9PXF0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh17E9PXF0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.08■□□□□ 0.49
Pcdh17E9PXF0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Pcdh17E9PXF0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh17E9PXF0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh17E9PXF0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh17E9PXF0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh17E9PXF0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh17E9PXF0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.08■□□□□ 0.48
Pcdh17E9PXF0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh17E9PXF0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh17E9PXF0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh17E9PXF0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh17E9PXF0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.08■□□□□ 0.48
Pcdh17E9PXF0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh17E9PXF0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh17E9PXF0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Pcdh17E9PXF0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Pcdh17E9PXF0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh17E9PXF0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh17E9PXF0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh17E9PXF0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh17E9PXF0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh17E9PXF0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.07■□□□□ 0.48
Pcdh17E9PXF0 Gm9988-201ENSMUST00000069786 435 ntBASIC18.07■□□□□ 0.48
Pcdh17E9PXF0 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.07■□□□□ 0.48
Pcdh17E9PXF0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms