Protein–RNA interactions for Protein: E9PVL6

Trim30b, Tripartite motif-containing 30B, mousemouse

Predictions only

Length 203 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30bE9PVL6 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim30bE9PVL6 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim30bE9PVL6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim30bE9PVL6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim30bE9PVL6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim30bE9PVL6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim30bE9PVL6 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Trim30bE9PVL6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Trim30bE9PVL6 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.92■□□□□ 0.94
Trim30bE9PVL6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim30bE9PVL6 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim30bE9PVL6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Trim30bE9PVL6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim30bE9PVL6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.91■□□□□ 0.94
Trim30bE9PVL6 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.91■□□□□ 0.94
Trim30bE9PVL6 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim30bE9PVL6 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim30bE9PVL6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim30bE9PVL6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim30bE9PVL6 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim30bE9PVL6 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
Trim30bE9PVL6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.9■□□□□ 0.94
Trim30bE9PVL6 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Trim30bE9PVL6 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim30bE9PVL6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim30bE9PVL6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim30bE9PVL6 Gm38205-201ENSMUST00000192243 258 ntBASIC20.9■□□□□ 0.94
Trim30bE9PVL6 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Trim30bE9PVL6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Trim30bE9PVL6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim30bE9PVL6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.89■□□□□ 0.94
Trim30bE9PVL6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.89■□□□□ 0.93
Trim30bE9PVL6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.89■□□□□ 0.93
Trim30bE9PVL6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Trim30bE9PVL6 Gm13146-201ENSMUST00000118508 780 ntBASIC20.89■□□□□ 0.93
Trim30bE9PVL6 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim30bE9PVL6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.89■□□□□ 0.93
Trim30bE9PVL6 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim30bE9PVL6 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.88■□□□□ 0.93
Trim30bE9PVL6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim30bE9PVL6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim30bE9PVL6 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.88■□□□□ 0.93
Trim30bE9PVL6 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.88■□□□□ 0.93
Trim30bE9PVL6 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.88■□□□□ 0.93
Trim30bE9PVL6 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Trim30bE9PVL6 AA386476-201ENSMUST00000098781 1665 ntBASIC20.88■□□□□ 0.93
Trim30bE9PVL6 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim30bE9PVL6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim30bE9PVL6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim30bE9PVL6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Trim30bE9PVL6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.87■□□□□ 0.93
Trim30bE9PVL6 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.87■□□□□ 0.93
Trim30bE9PVL6 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim30bE9PVL6 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim30bE9PVL6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
Trim30bE9PVL6 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.87■□□□□ 0.93
Trim30bE9PVL6 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.87■□□□□ 0.93
Trim30bE9PVL6 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.87■□□□□ 0.93
Trim30bE9PVL6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim30bE9PVL6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim30bE9PVL6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim30bE9PVL6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim30bE9PVL6 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim30bE9PVL6 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim30bE9PVL6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim30bE9PVL6 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim30bE9PVL6 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim30bE9PVL6 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim30bE9PVL6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim30bE9PVL6 Mir5133-201ENSMUST00000174955 77 ntBASIC20.86■□□□□ 0.93
Trim30bE9PVL6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.86■□□□□ 0.93
Trim30bE9PVL6 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim30bE9PVL6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim30bE9PVL6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim30bE9PVL6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Trim30bE9PVL6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim30bE9PVL6 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim30bE9PVL6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim30bE9PVL6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Trim30bE9PVL6 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.85■□□□□ 0.93
Trim30bE9PVL6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim30bE9PVL6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim30bE9PVL6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim30bE9PVL6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim30bE9PVL6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim30bE9PVL6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim30bE9PVL6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Trim30bE9PVL6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Trim30bE9PVL6 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.84■□□□□ 0.93
Trim30bE9PVL6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim30bE9PVL6 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trim30bE9PVL6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.84■□□□□ 0.93
Trim30bE9PVL6 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.83■□□□□ 0.93
Trim30bE9PVL6 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim30bE9PVL6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim30bE9PVL6 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Trim30bE9PVL6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim30bE9PVL6 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim30bE9PVL6 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim30bE9PVL6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 100.6 ms