Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Dchs1E9PVD3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.53■□□□□ 0.4
Dchs1E9PVD3 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Dchs1E9PVD3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Dchs1E9PVD3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Dchs1E9PVD3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Dchs1E9PVD3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Dchs1E9PVD3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Dchs1E9PVD3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Dchs1E9PVD3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Dchs1E9PVD3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Dchs1E9PVD3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.52■□□□□ 0.4
Dchs1E9PVD3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Dchs1E9PVD3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Dchs1E9PVD3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Dchs1E9PVD3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Dchs1E9PVD3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Dchs1E9PVD3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Dchs1E9PVD3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Dchs1E9PVD3 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Dchs1E9PVD3 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.51■□□□□ 0.39
Dchs1E9PVD3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Dchs1E9PVD3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Dchs1E9PVD3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Dchs1E9PVD3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Dchs1E9PVD3 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.51■□□□□ 0.39
Dchs1E9PVD3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Dchs1E9PVD3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.5■□□□□ 0.39
Dchs1E9PVD3 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Dchs1E9PVD3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Dchs1E9PVD3 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.5■□□□□ 0.39
Dchs1E9PVD3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Dchs1E9PVD3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Dchs1E9PVD3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Dchs1E9PVD3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Dchs1E9PVD3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Dchs1E9PVD3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Dchs1E9PVD3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Dchs1E9PVD3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Dchs1E9PVD3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Dchs1E9PVD3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Dchs1E9PVD3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Dchs1E9PVD3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Dchs1E9PVD3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
Dchs1E9PVD3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Dchs1E9PVD3 Gm13836-201ENSMUST00000121159 501 ntBASIC17.49■□□□□ 0.39
Dchs1E9PVD3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Dchs1E9PVD3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.49■□□□□ 0.39
Dchs1E9PVD3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Dchs1E9PVD3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Dchs1E9PVD3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Dchs1E9PVD3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Dchs1E9PVD3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Dchs1E9PVD3 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Dchs1E9PVD3 Gm5408-201ENSMUST00000197998 747 ntBASIC17.48■□□□□ 0.39
Dchs1E9PVD3 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.48■□□□□ 0.39
Dchs1E9PVD3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Dchs1E9PVD3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Dchs1E9PVD3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Dchs1E9PVD3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Dchs1E9PVD3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Dchs1E9PVD3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Dchs1E9PVD3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Dchs1E9PVD3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Dchs1E9PVD3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Dchs1E9PVD3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Dchs1E9PVD3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Dchs1E9PVD3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Dchs1E9PVD3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Dchs1E9PVD3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.48■□□□□ 0.39
Dchs1E9PVD3 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Dchs1E9PVD3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Dchs1E9PVD3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Dchs1E9PVD3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Dchs1E9PVD3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Dchs1E9PVD3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Dchs1E9PVD3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Dchs1E9PVD3 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Dchs1E9PVD3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Dchs1E9PVD3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Dchs1E9PVD3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Dchs1E9PVD3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Dchs1E9PVD3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Dchs1E9PVD3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Dchs1E9PVD3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Dchs1E9PVD3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Dchs1E9PVD3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Dchs1E9PVD3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.46■□□□□ 0.39
Dchs1E9PVD3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Dchs1E9PVD3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.46■□□□□ 0.39
Dchs1E9PVD3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.46■□□□□ 0.39
Dchs1E9PVD3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.46■□□□□ 0.39
Dchs1E9PVD3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Dchs1E9PVD3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Dchs1E9PVD3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Dchs1E9PVD3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Dchs1E9PVD3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Dchs1E9PVD3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Dchs1E9PVD3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Dchs1E9PVD3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms