Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp27D3YV89 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp27D3YV89 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp27D3YV89 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Mmp27D3YV89 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.43■□□□□ 0.22
Mmp27D3YV89 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp27D3YV89 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.43■□□□□ 0.22
Mmp27D3YV89 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp27D3YV89 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.43■□□□□ 0.22
Mmp27D3YV89 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Mmp27D3YV89 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp27D3YV89 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp27D3YV89 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp27D3YV89 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.42■□□□□ 0.22
Mmp27D3YV89 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp27D3YV89 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp27D3YV89 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp27D3YV89 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp27D3YV89 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Mmp27D3YV89 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Mmp27D3YV89 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Mmp27D3YV89 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp27D3YV89 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.42■□□□□ 0.22
Mmp27D3YV89 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp27D3YV89 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp27D3YV89 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.42■□□□□ 0.22
Mmp27D3YV89 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp27D3YV89 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.42■□□□□ 0.22
Mmp27D3YV89 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp27D3YV89 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.41■□□□□ 0.22
Mmp27D3YV89 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp27D3YV89 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp27D3YV89 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp27D3YV89 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp27D3YV89 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp27D3YV89 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp27D3YV89 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp27D3YV89 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp27D3YV89 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp27D3YV89 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.41■□□□□ 0.22
Mmp27D3YV89 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.41■□□□□ 0.22
Mmp27D3YV89 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.41■□□□□ 0.22
Mmp27D3YV89 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp27D3YV89 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.41■□□□□ 0.22
Mmp27D3YV89 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.41■□□□□ 0.22
Mmp27D3YV89 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp27D3YV89 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.41■□□□□ 0.22
Mmp27D3YV89 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.41■□□□□ 0.22
Mmp27D3YV89 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp27D3YV89 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp27D3YV89 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp27D3YV89 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp27D3YV89 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp27D3YV89 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp27D3YV89 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp27D3YV89 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.4■□□□□ 0.22
Mmp27D3YV89 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp27D3YV89 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp27D3YV89 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.4■□□□□ 0.22
Mmp27D3YV89 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Mmp27D3YV89 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp27D3YV89 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp27D3YV89 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp27D3YV89 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Mmp27D3YV89 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp27D3YV89 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Mmp27D3YV89 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp27D3YV89 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp27D3YV89 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp27D3YV89 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp27D3YV89 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp27D3YV89 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.39■□□□□ 0.21
Mmp27D3YV89 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp27D3YV89 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.39■□□□□ 0.21
Mmp27D3YV89 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.39■□□□□ 0.21
Mmp27D3YV89 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp27D3YV89 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp27D3YV89 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp27D3YV89 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp27D3YV89 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Mmp27D3YV89 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp27D3YV89 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp27D3YV89 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp27D3YV89 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.38■□□□□ 0.21
Mmp27D3YV89 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp27D3YV89 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Mmp27D3YV89 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp27D3YV89 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.38■□□□□ 0.21
Mmp27D3YV89 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp27D3YV89 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp27D3YV89 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp27D3YV89 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Mmp27D3YV89 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp27D3YV89 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.38■□□□□ 0.21
Mmp27D3YV89 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp27D3YV89 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp27D3YV89 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Mmp27D3YV89 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp27D3YV89 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp27D3YV89 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms