Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IsxA1A546 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
IsxA1A546 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.5
IsxA1A546 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IsxA1A546 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
IsxA1A546 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
IsxA1A546 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IsxA1A546 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
IsxA1A546 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.13■□□□□ 0.49
IsxA1A546 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
IsxA1A546 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IsxA1A546 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
IsxA1A546 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IsxA1A546 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.12■□□□□ 0.49
IsxA1A546 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IsxA1A546 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.12■□□□□ 0.49
IsxA1A546 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IsxA1A546 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IsxA1A546 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IsxA1A546 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.12■□□□□ 0.49
IsxA1A546 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IsxA1A546 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IsxA1A546 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
IsxA1A546 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.12■□□□□ 0.49
IsxA1A546 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IsxA1A546 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
IsxA1A546 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.11■□□□□ 0.49
IsxA1A546 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IsxA1A546 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
IsxA1A546 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.11■□□□□ 0.49
IsxA1A546 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IsxA1A546 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IsxA1A546 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
IsxA1A546 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
IsxA1A546 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
IsxA1A546 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.11■□□□□ 0.49
IsxA1A546 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
IsxA1A546 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IsxA1A546 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IsxA1A546 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IsxA1A546 BC021767-201ENSMUST00000126387 1716 ntBASIC18.11■□□□□ 0.49
IsxA1A546 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IsxA1A546 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
IsxA1A546 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
IsxA1A546 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IsxA1A546 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IsxA1A546 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
IsxA1A546 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IsxA1A546 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IsxA1A546 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.1■□□□□ 0.49
IsxA1A546 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
IsxA1A546 Gm5921-201ENSMUST00000075898 882 ntBASIC18.1■□□□□ 0.49
IsxA1A546 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IsxA1A546 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IsxA1A546 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
IsxA1A546 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IsxA1A546 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IsxA1A546 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IsxA1A546 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IsxA1A546 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IsxA1A546 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.09■□□□□ 0.49
IsxA1A546 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.09■□□□□ 0.49
IsxA1A546 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IsxA1A546 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
IsxA1A546 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.09■□□□□ 0.49
IsxA1A546 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IsxA1A546 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IsxA1A546 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.09■□□□□ 0.49
IsxA1A546 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.08■□□□□ 0.49
IsxA1A546 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
IsxA1A546 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
IsxA1A546 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
IsxA1A546 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
IsxA1A546 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
IsxA1A546 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
IsxA1A546 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
IsxA1A546 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.08■□□□□ 0.48
IsxA1A546 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
IsxA1A546 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
IsxA1A546 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
IsxA1A546 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
IsxA1A546 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
IsxA1A546 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
IsxA1A546 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
IsxA1A546 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
IsxA1A546 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
IsxA1A546 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
IsxA1A546 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
IsxA1A546 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
IsxA1A546 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
IsxA1A546 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
IsxA1A546 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
IsxA1A546 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
IsxA1A546 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
IsxA1A546 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.06■□□□□ 0.48
IsxA1A546 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IsxA1A546 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.06■□□□□ 0.48
IsxA1A546 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IsxA1A546 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IsxA1A546 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms