Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Gm28729A0A1B0GSW2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gm28729A0A1B0GSW2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm28729A0A1B0GSW2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gm28729A0A1B0GSW2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Gm28729A0A1B0GSW2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.21■□□□□ 0.67
Gm28729A0A1B0GSW2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Gm28729A0A1B0GSW2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm28729A0A1B0GSW2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Gm28729A0A1B0GSW2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm28729A0A1B0GSW2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm28729A0A1B0GSW2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm28729A0A1B0GSW2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gm28729A0A1B0GSW2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.21■□□□□ 0.67
Gm28729A0A1B0GSW2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gm28729A0A1B0GSW2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Gm28729A0A1B0GSW2 AA386476-201ENSMUST00000098781 1665 ntBASIC19.2■□□□□ 0.66
Gm28729A0A1B0GSW2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm28729A0A1B0GSW2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm28729A0A1B0GSW2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm28729A0A1B0GSW2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm28729A0A1B0GSW2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.2■□□□□ 0.66
Gm28729A0A1B0GSW2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gm28729A0A1B0GSW2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm28729A0A1B0GSW2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm28729A0A1B0GSW2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm28729A0A1B0GSW2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm28729A0A1B0GSW2 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.19■□□□□ 0.66
Gm28729A0A1B0GSW2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm28729A0A1B0GSW2 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.19■□□□□ 0.66
Gm28729A0A1B0GSW2 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Gm28729A0A1B0GSW2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm28729A0A1B0GSW2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm28729A0A1B0GSW2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm28729A0A1B0GSW2 Gm13146-201ENSMUST00000118508 780 ntBASIC19.18■□□□□ 0.66
Gm28729A0A1B0GSW2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.18■□□□□ 0.66
Gm28729A0A1B0GSW2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.18■□□□□ 0.66
Gm28729A0A1B0GSW2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.18■□□□□ 0.66
Gm28729A0A1B0GSW2 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.18■□□□□ 0.66
Gm28729A0A1B0GSW2 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.18■□□□□ 0.66
Gm28729A0A1B0GSW2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.18■□□□□ 0.66
Gm28729A0A1B0GSW2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Gm28729A0A1B0GSW2 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.18■□□□□ 0.66
Gm28729A0A1B0GSW2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm28729A0A1B0GSW2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.17■□□□□ 0.66
Gm28729A0A1B0GSW2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.17■□□□□ 0.66
Gm28729A0A1B0GSW2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.17■□□□□ 0.66
Gm28729A0A1B0GSW2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Gm28729A0A1B0GSW2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm28729A0A1B0GSW2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm28729A0A1B0GSW2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm28729A0A1B0GSW2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm28729A0A1B0GSW2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
Gm28729A0A1B0GSW2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm28729A0A1B0GSW2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm28729A0A1B0GSW2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.16■□□□□ 0.66
Gm28729A0A1B0GSW2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gm28729A0A1B0GSW2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.16■□□□□ 0.66
Gm28729A0A1B0GSW2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Gm28729A0A1B0GSW2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.16■□□□□ 0.66
Gm28729A0A1B0GSW2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.16■□□□□ 0.66
Gm28729A0A1B0GSW2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm28729A0A1B0GSW2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Gm28729A0A1B0GSW2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm28729A0A1B0GSW2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.15■□□□□ 0.66
Gm28729A0A1B0GSW2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm28729A0A1B0GSW2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm28729A0A1B0GSW2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gm28729A0A1B0GSW2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm28729A0A1B0GSW2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm28729A0A1B0GSW2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Gm28729A0A1B0GSW2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gm28729A0A1B0GSW2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm28729A0A1B0GSW2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm28729A0A1B0GSW2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Gm28729A0A1B0GSW2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm28729A0A1B0GSW2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm28729A0A1B0GSW2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gm28729A0A1B0GSW2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm28729A0A1B0GSW2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gm28729A0A1B0GSW2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm28729A0A1B0GSW2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Gm28729A0A1B0GSW2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm28729A0A1B0GSW2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm28729A0A1B0GSW2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm28729A0A1B0GSW2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Gm28729A0A1B0GSW2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm28729A0A1B0GSW2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Gm28729A0A1B0GSW2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm28729A0A1B0GSW2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm28729A0A1B0GSW2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Gm28729A0A1B0GSW2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Gm28729A0A1B0GSW2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.12■□□□□ 0.65
Gm28729A0A1B0GSW2 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.12■□□□□ 0.65
Gm28729A0A1B0GSW2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.12■□□□□ 0.65
Gm28729A0A1B0GSW2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm28729A0A1B0GSW2 Mir5133-201ENSMUST00000174955 77 ntBASIC19.12■□□□□ 0.65
Gm28729A0A1B0GSW2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm28729A0A1B0GSW2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.12■□□□□ 0.65
Gm28729A0A1B0GSW2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms