Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cfap99A0A140LIX9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cfap99A0A140LIX9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cfap99A0A140LIX9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC23.36■■□□□ 1.33
Cfap99A0A140LIX9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cfap99A0A140LIX9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cfap99A0A140LIX9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cfap99A0A140LIX9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cfap99A0A140LIX9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cfap99A0A140LIX9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cfap99A0A140LIX9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Cfap99A0A140LIX9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cfap99A0A140LIX9 Gm27045-201ENSMUST00000182145 1402 ntBASIC23.35■■□□□ 1.33
Cfap99A0A140LIX9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cfap99A0A140LIX9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cfap99A0A140LIX9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC23.35■■□□□ 1.33
Cfap99A0A140LIX9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Cfap99A0A140LIX9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cfap99A0A140LIX9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Cfap99A0A140LIX9 Gm42778-201ENSMUST00000199644 553 ntBASIC23.35■■□□□ 1.33
Cfap99A0A140LIX9 AV356131-201ENSMUST00000206201 750 ntBASIC23.35■■□□□ 1.33
Cfap99A0A140LIX9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC23.35■■□□□ 1.33
Cfap99A0A140LIX9 AC112142.1-201ENSMUST00000228796 918 ntBASIC23.35■■□□□ 1.33
Cfap99A0A140LIX9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Cfap99A0A140LIX9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Cfap99A0A140LIX9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cfap99A0A140LIX9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cfap99A0A140LIX9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cfap99A0A140LIX9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Cfap99A0A140LIX9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cfap99A0A140LIX9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cfap99A0A140LIX9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cfap99A0A140LIX9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Cfap99A0A140LIX9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cfap99A0A140LIX9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cfap99A0A140LIX9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cfap99A0A140LIX9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC23.34■■□□□ 1.33
Cfap99A0A140LIX9 Gm10033-202ENSMUST00000211874 928 ntBASIC23.34■■□□□ 1.33
Cfap99A0A140LIX9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cfap99A0A140LIX9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cfap99A0A140LIX9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cfap99A0A140LIX9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cfap99A0A140LIX9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cfap99A0A140LIX9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cfap99A0A140LIX9 Gm37035-201ENSMUST00000194809 2148 ntBASIC23.33■■□□□ 1.33
Cfap99A0A140LIX9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cfap99A0A140LIX9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cfap99A0A140LIX9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Cfap99A0A140LIX9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cfap99A0A140LIX9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC23.33■■□□□ 1.33
Cfap99A0A140LIX9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Cfap99A0A140LIX9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Cfap99A0A140LIX9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
Cfap99A0A140LIX9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cfap99A0A140LIX9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cfap99A0A140LIX9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
Cfap99A0A140LIX9 Gm11421-201ENSMUST00000122124 294 ntBASIC23.32■■□□□ 1.32
Cfap99A0A140LIX9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cfap99A0A140LIX9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cfap99A0A140LIX9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cfap99A0A140LIX9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cfap99A0A140LIX9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cfap99A0A140LIX9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Cfap99A0A140LIX9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Cfap99A0A140LIX9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cfap99A0A140LIX9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cfap99A0A140LIX9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cfap99A0A140LIX9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cfap99A0A140LIX9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC23.31■■□□□ 1.32
Cfap99A0A140LIX9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cfap99A0A140LIX9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Cfap99A0A140LIX9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cfap99A0A140LIX9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
Cfap99A0A140LIX9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC23.3■■□□□ 1.32
Cfap99A0A140LIX9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cfap99A0A140LIX9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cfap99A0A140LIX9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Cfap99A0A140LIX9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cfap99A0A140LIX9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Cfap99A0A140LIX9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cfap99A0A140LIX9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cfap99A0A140LIX9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cfap99A0A140LIX9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cfap99A0A140LIX9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC23.29■■□□□ 1.32
Cfap99A0A140LIX9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cfap99A0A140LIX9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cfap99A0A140LIX9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cfap99A0A140LIX9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC23.28■■□□□ 1.32
Cfap99A0A140LIX9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Cfap99A0A140LIX9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cfap99A0A140LIX9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cfap99A0A140LIX9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cfap99A0A140LIX9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC23.28■■□□□ 1.32
Cfap99A0A140LIX9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cfap99A0A140LIX9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cfap99A0A140LIX9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Cfap99A0A140LIX9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Cfap99A0A140LIX9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Cfap99A0A140LIX9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC23.27■■□□□ 1.32
Cfap99A0A140LIX9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC23.27■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms