Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc194A0A140LIT1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.44■□□□□ 0.7
Ccdc194A0A140LIT1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.44■□□□□ 0.7
Ccdc194A0A140LIT1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc194A0A140LIT1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc194A0A140LIT1 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc194A0A140LIT1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc194A0A140LIT1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.43■□□□□ 0.7
Ccdc194A0A140LIT1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc194A0A140LIT1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc194A0A140LIT1 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.43■□□□□ 0.7
Ccdc194A0A140LIT1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.43■□□□□ 0.7
Ccdc194A0A140LIT1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc194A0A140LIT1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc194A0A140LIT1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc194A0A140LIT1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc194A0A140LIT1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.42■□□□□ 0.7
Ccdc194A0A140LIT1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc194A0A140LIT1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ccdc194A0A140LIT1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ccdc194A0A140LIT1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc194A0A140LIT1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc194A0A140LIT1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc194A0A140LIT1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccdc194A0A140LIT1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc194A0A140LIT1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.41■□□□□ 0.7
Ccdc194A0A140LIT1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
Ccdc194A0A140LIT1 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.41■□□□□ 0.7
Ccdc194A0A140LIT1 Rps24-207ENSMUST00000224568 714 ntBASIC19.41■□□□□ 0.7
Ccdc194A0A140LIT1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc194A0A140LIT1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc194A0A140LIT1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc194A0A140LIT1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc194A0A140LIT1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ccdc194A0A140LIT1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc194A0A140LIT1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc194A0A140LIT1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc194A0A140LIT1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Ccdc194A0A140LIT1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ccdc194A0A140LIT1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc194A0A140LIT1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.39■□□□□ 0.69
Ccdc194A0A140LIT1 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.39■□□□□ 0.69
Ccdc194A0A140LIT1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.39■□□□□ 0.69
Ccdc194A0A140LIT1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc194A0A140LIT1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Ccdc194A0A140LIT1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc194A0A140LIT1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc194A0A140LIT1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc194A0A140LIT1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc194A0A140LIT1 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc194A0A140LIT1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc194A0A140LIT1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.38■□□□□ 0.69
Ccdc194A0A140LIT1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc194A0A140LIT1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc194A0A140LIT1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc194A0A140LIT1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc194A0A140LIT1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc194A0A140LIT1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc194A0A140LIT1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc194A0A140LIT1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc194A0A140LIT1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc194A0A140LIT1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc194A0A140LIT1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc194A0A140LIT1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc194A0A140LIT1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.37■□□□□ 0.69
Ccdc194A0A140LIT1 Gm14117-201ENSMUST00000122417 843 ntBASIC19.37■□□□□ 0.69
Ccdc194A0A140LIT1 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc194A0A140LIT1 Gm45102-201ENSMUST00000207427 857 ntBASIC19.37■□□□□ 0.69
Ccdc194A0A140LIT1 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc194A0A140LIT1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc194A0A140LIT1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc194A0A140LIT1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
Ccdc194A0A140LIT1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc194A0A140LIT1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc194A0A140LIT1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc194A0A140LIT1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc194A0A140LIT1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc194A0A140LIT1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.36■□□□□ 0.69
Ccdc194A0A140LIT1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc194A0A140LIT1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc194A0A140LIT1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc194A0A140LIT1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc194A0A140LIT1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc194A0A140LIT1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc194A0A140LIT1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc194A0A140LIT1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc194A0A140LIT1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc194A0A140LIT1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Ccdc194A0A140LIT1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc194A0A140LIT1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc194A0A140LIT1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc194A0A140LIT1 Iqck-206ENSMUST00000208658 2891 ntBASIC19.35■□□□□ 0.69
Ccdc194A0A140LIT1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.35■□□□□ 0.69
Ccdc194A0A140LIT1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc194A0A140LIT1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc194A0A140LIT1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc194A0A140LIT1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.35■□□□□ 0.69
Ccdc194A0A140LIT1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc194A0A140LIT1 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.34■□□□□ 0.69
Ccdc194A0A140LIT1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms