Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb8A0A140LI48 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb8A0A140LI48 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.55■□□□□ 0.4
Pcdhgb8A0A140LI48 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb8A0A140LI48 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb8A0A140LI48 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb8A0A140LI48 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb8A0A140LI48 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb8A0A140LI48 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb8A0A140LI48 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb8A0A140LI48 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb8A0A140LI48 Gm12821-201ENSMUST00000120022 600 ntBASIC17.54■□□□□ 0.4
Pcdhgb8A0A140LI48 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.54■□□□□ 0.4
Pcdhgb8A0A140LI48 Gm9870-201ENSMUST00000063874 645 ntBASIC17.54■□□□□ 0.4
Pcdhgb8A0A140LI48 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb8A0A140LI48 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb8A0A140LI48 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb8A0A140LI48 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb8A0A140LI48 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb8A0A140LI48 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb8A0A140LI48 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb8A0A140LI48 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb8A0A140LI48 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdhgb8A0A140LI48 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdhgb8A0A140LI48 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb8A0A140LI48 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb8A0A140LI48 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhgb8A0A140LI48 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhgb8A0A140LI48 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhgb8A0A140LI48 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhgb8A0A140LI48 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb8A0A140LI48 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb8A0A140LI48 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb8A0A140LI48 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgb8A0A140LI48 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgb8A0A140LI48 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgb8A0A140LI48 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Pcdhgb8A0A140LI48 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.52■□□□□ 0.4
Pcdhgb8A0A140LI48 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgb8A0A140LI48 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgb8A0A140LI48 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.52■□□□□ 0.4
Pcdhgb8A0A140LI48 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.52■□□□□ 0.4
Pcdhgb8A0A140LI48 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
Pcdhgb8A0A140LI48 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhgb8A0A140LI48 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhgb8A0A140LI48 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb8A0A140LI48 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb8A0A140LI48 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.51■□□□□ 0.39
Pcdhgb8A0A140LI48 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb8A0A140LI48 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Pcdhgb8A0A140LI48 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.51■□□□□ 0.39
Pcdhgb8A0A140LI48 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb8A0A140LI48 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Pcdhgb8A0A140LI48 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb8A0A140LI48 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb8A0A140LI48 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Pcdhgb8A0A140LI48 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb8A0A140LI48 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Pcdhgb8A0A140LI48 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb8A0A140LI48 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb8A0A140LI48 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb8A0A140LI48 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Pcdhgb8A0A140LI48 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb8A0A140LI48 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdhgb8A0A140LI48 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb8A0A140LI48 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb8A0A140LI48 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb8A0A140LI48 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Pcdhgb8A0A140LI48 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb8A0A140LI48 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.5■□□□□ 0.39
Pcdhgb8A0A140LI48 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.5■□□□□ 0.39
Pcdhgb8A0A140LI48 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb8A0A140LI48 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb8A0A140LI48 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb8A0A140LI48 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb8A0A140LI48 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb8A0A140LI48 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb8A0A140LI48 Golph3-205ENSMUST00000228671 2842 ntBASIC17.5■□□□□ 0.39
Pcdhgb8A0A140LI48 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb8A0A140LI48 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb8A0A140LI48 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.49■□□□□ 0.39
Pcdhgb8A0A140LI48 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb8A0A140LI48 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb8A0A140LI48 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb8A0A140LI48 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb8A0A140LI48 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb8A0A140LI48 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Pcdhgb8A0A140LI48 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Pcdhgb8A0A140LI48 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb8A0A140LI48 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb8A0A140LI48 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb8A0A140LI48 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb8A0A140LI48 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.49■□□□□ 0.39
Pcdhgb8A0A140LI48 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgb8A0A140LI48 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgb8A0A140LI48 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgb8A0A140LI48 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgb8A0A140LI48 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhgb8A0A140LI48 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgb8A0A140LI48 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms