Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm5580A0A0N4SVP8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.29■■□□□ 1
Gm5580A0A0N4SVP8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Gm5580A0A0N4SVP8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gm5580A0A0N4SVP8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm5580A0A0N4SVP8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Gm5580A0A0N4SVP8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm5580A0A0N4SVP8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Gm5580A0A0N4SVP8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gm5580A0A0N4SVP8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm5580A0A0N4SVP8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm5580A0A0N4SVP8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm5580A0A0N4SVP8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm5580A0A0N4SVP8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.28■■□□□ 1
Gm5580A0A0N4SVP8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Gm5580A0A0N4SVP8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm5580A0A0N4SVP8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.28■■□□□ 1
Gm5580A0A0N4SVP8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm5580A0A0N4SVP8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Gm5580A0A0N4SVP8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Gm5580A0A0N4SVP8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm5580A0A0N4SVP8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.27■■□□□ 1
Gm5580A0A0N4SVP8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Gm5580A0A0N4SVP8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.27■■□□□ 1
Gm5580A0A0N4SVP8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.27■■□□□ 1
Gm5580A0A0N4SVP8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.27■■□□□ 1
Gm5580A0A0N4SVP8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm5580A0A0N4SVP8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.27■■□□□ 1
Gm5580A0A0N4SVP8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm5580A0A0N4SVP8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.27■□□□□ 0.99
Gm5580A0A0N4SVP8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Gm5580A0A0N4SVP8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Gm5580A0A0N4SVP8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Gm5580A0A0N4SVP8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Gm5580A0A0N4SVP8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm5580A0A0N4SVP8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.26■□□□□ 0.99
Gm5580A0A0N4SVP8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm5580A0A0N4SVP8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.26■□□□□ 0.99
Gm5580A0A0N4SVP8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm5580A0A0N4SVP8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm5580A0A0N4SVP8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm5580A0A0N4SVP8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm5580A0A0N4SVP8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.25■□□□□ 0.99
Gm5580A0A0N4SVP8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.25■□□□□ 0.99
Gm5580A0A0N4SVP8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.25■□□□□ 0.99
Gm5580A0A0N4SVP8 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.25■□□□□ 0.99
Gm5580A0A0N4SVP8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm5580A0A0N4SVP8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm5580A0A0N4SVP8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Gm5580A0A0N4SVP8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Gm5580A0A0N4SVP8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm5580A0A0N4SVP8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm5580A0A0N4SVP8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm5580A0A0N4SVP8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm5580A0A0N4SVP8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm5580A0A0N4SVP8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm5580A0A0N4SVP8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gm5580A0A0N4SVP8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.24■□□□□ 0.99
Gm5580A0A0N4SVP8 Gm45102-201ENSMUST00000207427 857 ntBASIC21.24■□□□□ 0.99
Gm5580A0A0N4SVP8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm5580A0A0N4SVP8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Gm5580A0A0N4SVP8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm5580A0A0N4SVP8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm5580A0A0N4SVP8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm5580A0A0N4SVP8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm5580A0A0N4SVP8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm5580A0A0N4SVP8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm5580A0A0N4SVP8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gm5580A0A0N4SVP8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm5580A0A0N4SVP8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Gm5580A0A0N4SVP8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.22■□□□□ 0.99
Gm5580A0A0N4SVP8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm5580A0A0N4SVP8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
Gm5580A0A0N4SVP8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm5580A0A0N4SVP8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.22■□□□□ 0.99
Gm5580A0A0N4SVP8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Gm5580A0A0N4SVP8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.22■□□□□ 0.99
Gm5580A0A0N4SVP8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm5580A0A0N4SVP8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm5580A0A0N4SVP8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm5580A0A0N4SVP8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Gm5580A0A0N4SVP8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Gm5580A0A0N4SVP8 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.21■□□□□ 0.99
Gm5580A0A0N4SVP8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm5580A0A0N4SVP8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.21■□□□□ 0.99
Gm5580A0A0N4SVP8 Gm14117-201ENSMUST00000122417 843 ntBASIC21.21■□□□□ 0.99
Gm5580A0A0N4SVP8 Gm9959-201ENSMUST00000068277 390 ntBASIC21.21■□□□□ 0.99
Gm5580A0A0N4SVP8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm5580A0A0N4SVP8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm5580A0A0N4SVP8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.21■□□□□ 0.99
Gm5580A0A0N4SVP8 AA386476-201ENSMUST00000098781 1665 ntBASIC21.21■□□□□ 0.99
Gm5580A0A0N4SVP8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Gm5580A0A0N4SVP8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm5580A0A0N4SVP8 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm5580A0A0N4SVP8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm5580A0A0N4SVP8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm5580A0A0N4SVP8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm5580A0A0N4SVP8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm5580A0A0N4SVP8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Gm5580A0A0N4SVP8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms