Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv29A0A0G2LB96 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv29A0A0G2LB96 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv29A0A0G2LB96 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv29A0A0G2LB96 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv29A0A0G2LB96 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Trbv29A0A0G2LB96 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv29A0A0G2LB96 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv29A0A0G2LB96 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv29A0A0G2LB96 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trbv29A0A0G2LB96 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv29A0A0G2LB96 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv29A0A0G2LB96 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv29A0A0G2LB96 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv29A0A0G2LB96 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv29A0A0G2LB96 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.19■□□□□ 0.18
Trbv29A0A0G2LB96 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.19■□□□□ 0.18
Trbv29A0A0G2LB96 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv29A0A0G2LB96 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trbv29A0A0G2LB96 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trbv29A0A0G2LB96 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv29A0A0G2LB96 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trbv29A0A0G2LB96 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv29A0A0G2LB96 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv29A0A0G2LB96 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv29A0A0G2LB96 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv29A0A0G2LB96 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv29A0A0G2LB96 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv29A0A0G2LB96 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv29A0A0G2LB96 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.18■□□□□ 0.18
Trbv29A0A0G2LB96 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv29A0A0G2LB96 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trbv29A0A0G2LB96 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv29A0A0G2LB96 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv29A0A0G2LB96 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv29A0A0G2LB96 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv29A0A0G2LB96 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv29A0A0G2LB96 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Trbv29A0A0G2LB96 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.17■□□□□ 0.18
Trbv29A0A0G2LB96 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.17■□□□□ 0.18
Trbv29A0A0G2LB96 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.17■□□□□ 0.18
Trbv29A0A0G2LB96 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv29A0A0G2LB96 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv29A0A0G2LB96 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv29A0A0G2LB96 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trbv29A0A0G2LB96 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv29A0A0G2LB96 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv29A0A0G2LB96 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
Trbv29A0A0G2LB96 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv29A0A0G2LB96 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv29A0A0G2LB96 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv29A0A0G2LB96 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv29A0A0G2LB96 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trbv29A0A0G2LB96 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv29A0A0G2LB96 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv29A0A0G2LB96 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv29A0A0G2LB96 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv29A0A0G2LB96 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv29A0A0G2LB96 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv29A0A0G2LB96 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv29A0A0G2LB96 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv29A0A0G2LB96 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Trbv29A0A0G2LB96 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv29A0A0G2LB96 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trbv29A0A0G2LB96 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv29A0A0G2LB96 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trbv29A0A0G2LB96 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.16■□□□□ 0.18
Trbv29A0A0G2LB96 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv29A0A0G2LB96 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv29A0A0G2LB96 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv29A0A0G2LB96 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.15■□□□□ 0.18
Trbv29A0A0G2LB96 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv29A0A0G2LB96 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv29A0A0G2LB96 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv29A0A0G2LB96 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.15■□□□□ 0.18
Trbv29A0A0G2LB96 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv29A0A0G2LB96 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.15■□□□□ 0.18
Trbv29A0A0G2LB96 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv29A0A0G2LB96 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv29A0A0G2LB96 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv29A0A0G2LB96 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trbv29A0A0G2LB96 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trbv29A0A0G2LB96 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.14■□□□□ 0.18
Trbv29A0A0G2LB96 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Trbv29A0A0G2LB96 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv29A0A0G2LB96 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv29A0A0G2LB96 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv29A0A0G2LB96 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv29A0A0G2LB96 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trbv29A0A0G2LB96 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv29A0A0G2LB96 Golph3-205ENSMUST00000228671 2842 ntBASIC16.14■□□□□ 0.17
Trbv29A0A0G2LB96 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv29A0A0G2LB96 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trbv29A0A0G2LB96 AA386476-201ENSMUST00000098781 1665 ntBASIC16.14■□□□□ 0.17
Trbv29A0A0G2LB96 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv29A0A0G2LB96 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv29A0A0G2LB96 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv29A0A0G2LB96 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv29A0A0G2LB96 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv29A0A0G2LB96 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms