Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13n-4A0A0G2JG01 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13n-4A0A0G2JG01 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13n-4A0A0G2JG01 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trav13n-4A0A0G2JG01 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13n-4A0A0G2JG01 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13n-4A0A0G2JG01 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trav13n-4A0A0G2JG01 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13n-4A0A0G2JG01 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13n-4A0A0G2JG01 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trav13n-4A0A0G2JG01 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13n-4A0A0G2JG01 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13n-4A0A0G2JG01 Gm43017-201ENSMUST00000198296 752 ntBASIC15.79■□□□□ 0.12
Trav13n-4A0A0G2JG01 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trav13n-4A0A0G2JG01 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13n-4A0A0G2JG01 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13n-4A0A0G2JG01 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13n-4A0A0G2JG01 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.79■□□□□ 0.12
Trav13n-4A0A0G2JG01 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13n-4A0A0G2JG01 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13n-4A0A0G2JG01 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13n-4A0A0G2JG01 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13n-4A0A0G2JG01 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13n-4A0A0G2JG01 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trav13n-4A0A0G2JG01 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13n-4A0A0G2JG01 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13n-4A0A0G2JG01 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13n-4A0A0G2JG01 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13n-4A0A0G2JG01 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13n-4A0A0G2JG01 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13n-4A0A0G2JG01 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13n-4A0A0G2JG01 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Trav13n-4A0A0G2JG01 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13n-4A0A0G2JG01 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Trav13n-4A0A0G2JG01 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Trav13n-4A0A0G2JG01 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC15.78■□□□□ 0.12
Trav13n-4A0A0G2JG01 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13n-4A0A0G2JG01 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13n-4A0A0G2JG01 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13n-4A0A0G2JG01 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13n-4A0A0G2JG01 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav13n-4A0A0G2JG01 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13n-4A0A0G2JG01 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13n-4A0A0G2JG01 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav13n-4A0A0G2JG01 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav13n-4A0A0G2JG01 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav13n-4A0A0G2JG01 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Trav13n-4A0A0G2JG01 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav13n-4A0A0G2JG01 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav13n-4A0A0G2JG01 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav13n-4A0A0G2JG01 Gm2011-201ENSMUST00000203124 1263 ntBASIC15.77■□□□□ 0.12
Trav13n-4A0A0G2JG01 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav13n-4A0A0G2JG01 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav13n-4A0A0G2JG01 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.77■□□□□ 0.11
Trav13n-4A0A0G2JG01 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav13n-4A0A0G2JG01 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav13n-4A0A0G2JG01 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13n-4A0A0G2JG01 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13n-4A0A0G2JG01 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13n-4A0A0G2JG01 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13n-4A0A0G2JG01 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav13n-4A0A0G2JG01 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13n-4A0A0G2JG01 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav13n-4A0A0G2JG01 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13n-4A0A0G2JG01 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13n-4A0A0G2JG01 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13n-4A0A0G2JG01 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13n-4A0A0G2JG01 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13n-4A0A0G2JG01 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13n-4A0A0G2JG01 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13n-4A0A0G2JG01 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav13n-4A0A0G2JG01 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13n-4A0A0G2JG01 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13n-4A0A0G2JG01 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13n-4A0A0G2JG01 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13n-4A0A0G2JG01 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Trav13n-4A0A0G2JG01 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13n-4A0A0G2JG01 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13n-4A0A0G2JG01 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13n-4A0A0G2JG01 Gm8493-201ENSMUST00000196881 489 ntBASIC15.75■□□□□ 0.11
Trav13n-4A0A0G2JG01 Gm21168-201ENSMUST00000199646 1096 ntBASIC15.75■□□□□ 0.11
Trav13n-4A0A0G2JG01 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13n-4A0A0G2JG01 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13n-4A0A0G2JG01 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trav13n-4A0A0G2JG01 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13n-4A0A0G2JG01 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13n-4A0A0G2JG01 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13n-4A0A0G2JG01 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13n-4A0A0G2JG01 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13n-4A0A0G2JG01 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13n-4A0A0G2JG01 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13n-4A0A0G2JG01 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trav13n-4A0A0G2JG01 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
Trav13n-4A0A0G2JG01 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.74■□□□□ 0.11
Trav13n-4A0A0G2JG01 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13n-4A0A0G2JG01 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13n-4A0A0G2JG01 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13n-4A0A0G2JG01 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13n-4A0A0G2JG01 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13n-4A0A0G2JG01 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms