Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13n-1A0A0G2JEU8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
Trav13n-1A0A0G2JEU8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13n-1A0A0G2JEU8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13n-1A0A0G2JEU8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-1A0A0G2JEU8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav13n-1A0A0G2JEU8 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-1A0A0G2JEU8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-1A0A0G2JEU8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-1A0A0G2JEU8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trav13n-1A0A0G2JEU8 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav13n-1A0A0G2JEU8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-1A0A0G2JEU8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-1A0A0G2JEU8 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-1A0A0G2JEU8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-1A0A0G2JEU8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-1A0A0G2JEU8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-1A0A0G2JEU8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Trav13n-1A0A0G2JEU8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Trav13n-1A0A0G2JEU8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-1A0A0G2JEU8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-1A0A0G2JEU8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Trav13n-1A0A0G2JEU8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-1A0A0G2JEU8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-1A0A0G2JEU8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-1A0A0G2JEU8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-1A0A0G2JEU8 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-1A0A0G2JEU8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav13n-1A0A0G2JEU8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav13n-1A0A0G2JEU8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav13n-1A0A0G2JEU8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Mir6236-201ENSMUST00000184437 123 ntBASIC14.08□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.08□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13n-1A0A0G2JEU8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC14.08□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13n-1A0A0G2JEU8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-1A0A0G2JEU8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav13n-1A0A0G2JEU8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.07□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Gm26833-201ENSMUST00000180899 440 ntBASIC14.07□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-1A0A0G2JEU8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-1A0A0G2JEU8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.06□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.06□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.06□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13n-1A0A0G2JEU8 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav13n-1A0A0G2JEU8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms