Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9-4A0A0B4J1K2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav9-4A0A0B4J1K2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9-4A0A0B4J1K2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9-4A0A0B4J1K2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9-4A0A0B4J1K2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9-4A0A0B4J1K2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.66□□□□□ -0.06
Trav9-4A0A0B4J1K2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9-4A0A0B4J1K2 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9-4A0A0B4J1K2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9-4A0A0B4J1K2 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9-4A0A0B4J1K2 Gm8493-201ENSMUST00000196881 489 ntBASIC14.66□□□□□ -0.06
Trav9-4A0A0B4J1K2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9-4A0A0B4J1K2 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9-4A0A0B4J1K2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.66□□□□□ -0.06
Trav9-4A0A0B4J1K2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9-4A0A0B4J1K2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9-4A0A0B4J1K2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9-4A0A0B4J1K2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9-4A0A0B4J1K2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9-4A0A0B4J1K2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9-4A0A0B4J1K2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9-4A0A0B4J1K2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9-4A0A0B4J1K2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9-4A0A0B4J1K2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav9-4A0A0B4J1K2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9-4A0A0B4J1K2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9-4A0A0B4J1K2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9-4A0A0B4J1K2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav9-4A0A0B4J1K2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Trav9-4A0A0B4J1K2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9-4A0A0B4J1K2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9-4A0A0B4J1K2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9-4A0A0B4J1K2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.65□□□□□ -0.06
Trav9-4A0A0B4J1K2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9-4A0A0B4J1K2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9-4A0A0B4J1K2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9-4A0A0B4J1K2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav9-4A0A0B4J1K2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav9-4A0A0B4J1K2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav9-4A0A0B4J1K2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
Trav9-4A0A0B4J1K2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9-4A0A0B4J1K2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9-4A0A0B4J1K2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.64□□□□□ -0.07
Trav9-4A0A0B4J1K2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Trav9-4A0A0B4J1K2 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Trav9-4A0A0B4J1K2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9-4A0A0B4J1K2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9-4A0A0B4J1K2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Trav9-4A0A0B4J1K2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9-4A0A0B4J1K2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9-4A0A0B4J1K2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9-4A0A0B4J1K2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9-4A0A0B4J1K2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9-4A0A0B4J1K2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav9-4A0A0B4J1K2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9-4A0A0B4J1K2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.63□□□□□ -0.07
Trav9-4A0A0B4J1K2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9-4A0A0B4J1K2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav9-4A0A0B4J1K2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav9-4A0A0B4J1K2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav9-4A0A0B4J1K2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav9-4A0A0B4J1K2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav9-4A0A0B4J1K2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9-4A0A0B4J1K2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9-4A0A0B4J1K2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.63□□□□□ -0.07
Trav9-4A0A0B4J1K2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9-4A0A0B4J1K2 Gm6139-201ENSMUST00000079261 882 ntBASIC14.63□□□□□ -0.07
Trav9-4A0A0B4J1K2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9-4A0A0B4J1K2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9-4A0A0B4J1K2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9-4A0A0B4J1K2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14.63□□□□□ -0.07
Trav9-4A0A0B4J1K2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9-4A0A0B4J1K2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9-4A0A0B4J1K2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9-4A0A0B4J1K2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9-4A0A0B4J1K2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9-4A0A0B4J1K2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9-4A0A0B4J1K2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9-4A0A0B4J1K2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9-4A0A0B4J1K2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9-4A0A0B4J1K2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.62□□□□□ -0.07
Trav9-4A0A0B4J1K2 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.62□□□□□ -0.07
Trav9-4A0A0B4J1K2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9-4A0A0B4J1K2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9-4A0A0B4J1K2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9-4A0A0B4J1K2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9-4A0A0B4J1K2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9-4A0A0B4J1K2 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.62□□□□□ -0.07
Trav9-4A0A0B4J1K2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9-4A0A0B4J1K2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.61□□□□□ -0.07
Trav9-4A0A0B4J1K2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9-4A0A0B4J1K2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9-4A0A0B4J1K2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9-4A0A0B4J1K2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9-4A0A0B4J1K2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9-4A0A0B4J1K2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9-4A0A0B4J1K2 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9-4A0A0B4J1K2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9-4A0A0B4J1K2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms